Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.2171	Atpif1	ATPase inhibitory factor 1	4		11983
Gene Ontology	enzyme inhibitor activity | mitochondrion | negative regulation of nucleoside metabolism
Human Homolog	ATPIF1[ATPase inhibitory factor 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 54 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCTTTGAATG (2) 93 0.093 P8 Cb GC GTCGGCCGCC (25) 3.3 0.0033 P8 Cb GC GAAACCTGGG (8) 1.6 0.0016 P8 Cb GC GATACGGGCG 1.6 0.0016 Cb medulloblastoma GCTTTGAATG (2) 34.7 0.0347 P8 GC+1d culture GCTTTGAATG (2) 85.6 0.0856 P8 GC+1d culture CTATCCGACG 1.1 0.0011 P8 GC+1d culture GTCGGCCGCC (25) 1.1 0.0011 P8 GC+SHH+1d culture GCTTTGAATG (2) 85.5 0.0855 P8 GC+SHH+1d culture GTCGGCCGCC (25) 4.7 0.0047 P8 GC+SHH+1d culture ACTAGTGCTT (80) 1.2 0.0012 P8 GC+SHH+1d culture CTATCCGACG 1.2 0.0012 P8 GC+SHH+1d culture GATACGGGCG 1.2 0.0012 3T3 fibroblasts GCTTTGAATG (2) 3.5 0.0035 3T3 fibroblasts GTCGGCCGCC (25) 3.5 0.0035 E15 cortex GCTTTGAATG (2) 44.5 0.0445 P1 cortex GCTTTGAATG (2) 27.3 0.0273 Hypothalamus GCTTTGAATG (2) 41.7 0.0417 Hypothalamus GCCTTTGAAT (3) 3.6 0.0036 Hypothalamus GTGTTTCCTC (2) 3.6 0.0036 Hypothalamus GTCGGCCGCC (25) 1.8 0.0018 E12.5 retina GCTTTGAATG (2) 54.4 0.0544 E12.5 retina ACTAGTGCTT (80) 1.9 0.0019 E12.5 retina GAAACCTGGG (8) 1.9 0.0019 E12.5 retina GTCGGCCGCC (25) 1.9 0.0019 E14.5 retina GCTTTGAATG (2) 65.6 0.0656 E14.5 retina GTCGGCCGCC (25) 3.6 0.0036 E14.5 retina AAGATGAGAT (2) 1.8 0.0018 E16.5 retina GCTTTGAATG (2) 48.9 0.0489 E16.5 retina AAGATGAGAT (2) 3.6 0.0036 E16.5 retina GATACGGGCG 1.8 0.0018 E18.5 retina GCTTTGAATG (2) 49.1 0.0491 E18.5 retina GTGTTTCCTC (2) 1.8 0.0018 P0.5 retina GCTTTGAATG (2) 43.2 0.0432 P0.5 retina GTCGGCCGCC (25) 5.9 0.0059 P2.5 retina GCTTTGAATG (2) 66.9 0.0669 P2.5 retina CTATCCGACG 3.5 0.0035 P2.5 retina GTCGGCCGCC (25) 3.5 0.0035 P4.5 retina GCTTTGAATG (2) 53.5 0.0535 P4.5 retina ACTAGTGCTT (80) 2 0.002 P4.5 retina GTCGGCCGCC (25) 2 0.002 P6.5 retina GCTTTGAATG (2) 58.4 0.0584 P6.5 retina AAGATGAGAT (2) 1.7 0.0017 P10.5 crx- retina GCTTTGAATG (2) 83.6 0.0836 P10.5 crx- retina GTCGGCCGCC (25) 3.7 0.0037 P10.5 crx- retina GTGTTTCCTC (2) 1.9 0.0019 P10.5 crx+ retina GCTTTGAATG (2) 44.2 0.0442 P10.5 crx+ retina CTATCCGACG 3.8 0.0038 P10.5 crx+ retina GTCGGCCGCC (25) 3.8 0.0038 Adult retinal GCTTTGAATG (2) 16.7 0.0167 Adult retinal GCCTTTGAAT (3) 3.7 0.0037 Adult retinal GAAACCTGGG (8) 1.9 0.0019 Adult retinal GTCGGCCGCC (25) 1.9 0.0019 ONL GCTTTGAATG (2) 21.1 0.0211