Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.217116	Mmp15	matrix metalloproteinase 15	8	8 45.5 cM	17388
Gene Ontology	extracellular matrix | extracellular space | hydrolase activity | integral to membrane | metalloendopeptidase activity | metallopeptidase activity | proteolysis and peptidolysis | zinc ion binding
Human Homolog	MMP15[matrix metalloproteinase 15 (membrane-inserted)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 44 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTGGCTCACG (9) 6.5 0.0065 P8 Cb GC TTCAGAGAAT 4.9 0.0049 P8 Cb GC CTCCCTCTCT 1.6 0.0016 Cb medulloblastoma GTGGCTCACG (9) 11.6 0.0116 Cb medulloblastoma TTCAGAGAAT 4.6 0.0046 Cb medulloblastoma GTACAGCGTC (3) 2.3 0.0023 P8 GC+1d culture GTGGCTCACG (9) 16 0.016 P8 GC+1d culture GTACAGCGTC (3) 1.1 0.0011 P8 GC+1d culture TTCAGAGAAT 1.1 0.0011 P8 GC+SHH+1d culture GTGGCTCACG (9) 11.7 0.0117 P8 GC+SHH+1d culture GGGGGAAAAA (20) 2.3 0.0023 P8 GC+SHH+1d culture TTCAGAGAAT 2.3 0.0023 P8 GC+SHH+1d culture GTACAGCGTC (3) 1.2 0.0012 3T3 fibroblasts GTGGCTCACG (9) 17.5 0.0175 3T3 fibroblasts CTCCCTCTCT 3.5 0.0035 E15 cortex GTGGCTCACG (9) 24.7 0.0247 E15 cortex GGGGGAAAAA (20) 9.9 0.0099 P1 cortex GGGGGAAAAA (20) 4.5 0.0045 Hypothalamus GTGGCTCACG (9) 7.2 0.0072 Hypothalamus GGGGGAAAAA (20) 1.8 0.0018 E12.5 retina GTGGCTCACG (9) 7.5 0.0075 E14.5 retina GTGGCTCACG (9) 9.1 0.0091 E14.5 retina TTCAGAGAAT 3.6 0.0036 E16.5 retina GTGGCTCACG (9) 14.5 0.0145 E16.5 retina TTCAGAGAAT 3.6 0.0036 E18.5 retina GTGGCTCACG (9) 16.4 0.0164 E18.5 retina TTCAGAGAAT 7.3 0.0073 E18.5 retina GGGGGAAAAA (20) 1.8 0.0018 P0.5 retina GTGGCTCACG (9) 11.8 0.0118 P2.5 retina GTGGCTCACG (9) 12.3 0.0123 P2.5 retina TTCAGAGAAT 3.5 0.0035 P2.5 retina GGGGGAAAAA (20) 1.8 0.0018 P2.5 retina GTACAGCGTC (3) 1.8 0.0018 P4.5 retina GTGGCTCACG (9) 7.9 0.0079 P4.5 retina CTCCCTCTCT 2 0.002 P4.5 retina TTCAGAGAAT 2 0.002 P6.5 retina GTGGCTCACG (9) 10 0.01 P6.5 retina TTCAGAGAAT 3.3 0.0033 P10.5 crx- retina GTGGCTCACG (9) 5.6 0.0056 P10.5 crx+ retina GTGGCTCACG (9) 11.5 0.0115 P10.5 crx+ retina GTACAGCGTC (3) 1.9 0.0019 Adult retinal GTGGCTCACG (9) 9.3 0.0093 ONL GTGGCTCACG (9) 24.9 0.0249 ONL TTCAGAGAAT 1.9 0.0019