Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.217318	D9Ertd256e	DNA segment, Chr 9, ERATO Doi 256, expressed	9	9 59.0 cM	52179
Mm.217318	Mtap4	microtubule-associated protein 4	9	9 58.0 cM	17758
Gene Ontology	cytoskeletal regulatory protein binding | microtubule associated complex | microtubule stabilization | microtubule-based process
Human Homolog	MAP4[microtubule-associated protein 4]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 106 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTTTCTAATA (3) 4.9 0.0049 P8 Cb GC TCTGTAATTG (2) 3.3 0.0033 P8 Cb GC ATTTAAAAAA (10) 1.6 0.0016 P8 Cb GC GATGGGATGG (5) 1.6 0.0016 Cb medulloblastoma TCTGTAATTG (2) 20.8 0.0208 Cb medulloblastoma GCTCCAGCCT (3) 11.6 0.0116 Cb medulloblastoma ATCAACATTG (2) 6.9 0.0069 Cb medulloblastoma GTTTCTAATA (3) 4.6 0.0046 Cb medulloblastoma AACTTTGAGC (4) 2.3 0.0023 Cb medulloblastoma ATTTAAAAAA (10) 2.3 0.0023 Cb medulloblastoma CAGTTACAGA (7) 2.3 0.0023 Cb medulloblastoma GATTCTGTGG (5) 2.3 0.0023 Cb medulloblastoma GCCTGTGGTC (5) 2.3 0.0023 Cb medulloblastoma GGTTCACTCT (12) 2.3 0.0023 Cb medulloblastoma TAAGTTTAAA (6) 2.3 0.0023 Cb medulloblastoma TAGAAGAAGC (2) 2.3 0.0023 P8 GC+1d culture TCTGTAATTG (2) 16 0.016 P8 GC+1d culture CAGTTACAGA (7) 2.3 0.0023 P8 GC+1d culture TAGAAGAAGC (2) 2.3 0.0023 P8 GC+1d culture ATTTAAAAAA (10) 1.1 0.0011 P8 GC+1d culture GATGGGATGG (5) 1.1 0.0011 P8 GC+1d culture GATTCTGTGG (5) 1.1 0.0011 P8 GC+1d culture GCTGGGCTGG (4) 1.1 0.0011 P8 GC+1d culture GTTTCTAATA (3) 1.1 0.0011 P8 GC+1d culture TAAGTTTAAA (6) 1.1 0.0011 P8 GC+SHH+1d culture TCTGTAATTG (2) 11.7 0.0117 P8 GC+SHH+1d culture GTTTCTAATA (3) 2.3 0.0023 P8 GC+SHH+1d culture ATTTAAAAAA (10) 1.2 0.0012 3T3 fibroblasts GCCTGTGGTC (5) 7 0.007 3T3 fibroblasts GATTCTGTGG (5) 3.5 0.0035 E15 cortex GCTGGGCGGG (3) 9.9 0.0099 E15 cortex GCTCCAGCCT (3) 4.9 0.0049 E15 cortex GCTGGGCTGG (4) 4.9 0.0049 E15 cortex TCTGTAATTG (2) 4.9 0.0049 P1 cortex TCTGTAATTG (2) 13.6 0.0136 P1 cortex ATTTAAAAAA (10) 9.1 0.0091 P1 cortex GCTGGGCGGG (3) 9.1 0.0091 Hypothalamus TCTGTAATTG (2) 9.1 0.0091 Hypothalamus TAGAAGAAGC (2) 7.2 0.0072 Hypothalamus GCTCCAGCCT (3) 3.6 0.0036 Hypothalamus AACTTTGAGC (4) 1.8 0.0018 Hypothalamus ACTGTGGCTG (8) 1.8 0.0018 Hypothalamus ATCAACATTG (2) 1.8 0.0018 Hypothalamus ATTTAAAAAA (10) 1.8 0.0018 Hypothalamus GCCTGTGGTC (5) 1.8 0.0018 Hypothalamus GCTGGGCGGG (3) 1.8 0.0018 Hypothalamus GCTGGGCTGG (4) 1.8 0.0018 Hypothalamus GTTTCTAATA (3) 1.8 0.0018 E12.5 retina CAGTTACAGA (7) 3.8 0.0038 E12.5 retina TCACTTCCTT (4) 3.8 0.0038 E12.5 retina TCTGTAATTG (2) 3.8 0.0038 E12.5 retina ATTTAAAAAA (10) 1.9 0.0019 E12.5 retina GTTTCTAATA (3) 1.9 0.0019 E14.5 retina TCTGTAATTG (2) 12.8 0.0128 E14.5 retina ATTTAAAAAA (10) 3.6 0.0036 E14.5 retina GTTTCTAATA (3) 3.6 0.0036 E14.5 retina ACTGTGGCTG (8) 1.8 0.0018 E14.5 retina GCCTGTGGTC (5) 1.8 0.0018 E14.5 retina GGTTCACTCT (12) 1.8 0.0018 E14.5 retina TAAGTTTAAA (6) 1.8 0.0018 E16.5 retina TCTGTAATTG (2) 16.3 0.0163 E16.5 retina GTTTCTAATA (3) 5.4 0.0054 E16.5 retina GCCTGTGGTC (5) 3.6 0.0036 E16.5 retina AACTTTGAGC (4) 1.8 0.0018 E16.5 retina GATGGGATGG (5) 1.8 0.0018 E18.5 retina TCTGTAATTG (2) 10.9 0.0109 E18.5 retina GTTTCTAATA (3) 7.3 0.0073 E18.5 retina ATTTAAAAAA (10) 1.8 0.0018 E18.5 retina TCACTTCCTT (4) 1.8 0.0018 E18.5 retina TGATGTGCAT (3) 1.8 0.0018 P0.5 retina TCTGTAATTG (2) 5.9 0.0059 P0.5 retina GTTTCTAATA (3) 3.9 0.0039 P0.5 retina GCCTGTGGTC (5) 2 0.002 P2.5 retina TCTGTAATTG (2) 8.8 0.0088 P2.5 retina ACTGTGGCTG (8) 1.8 0.0018 P2.5 retina GTTTCTAATA (3) 1.8 0.0018 P4.5 retina TCTGTAATTG (2) 17.8 0.0178 P4.5 retina ATTTAAAAAA (10) 4 0.004 P4.5 retina GCCTGTGGTC (5) 2 0.002 P4.5 retina GTTTCTAATA (3) 2 0.002 P6.5 retina TCTGTAATTG (2) 23.3 0.0233 P6.5 retina GTTTCTAATA (3) 3.3 0.0033 P6.5 retina TCACTTCCTT (4) 3.3 0.0033 P6.5 retina ATTTAAAAAA (10) 1.7 0.0017 P6.5 retina GGTTCACTCT (12) 1.7 0.0017 P6.5 retina TAAGTTTAAA (6) 1.7 0.0017 P10.5 crx- retina TCTGTAATTG (2) 46.4 0.0464 P10.5 crx- retina GTTTCTAATA (3) 5.6 0.0056 P10.5 crx- retina CAGTTACAGA (7) 3.7 0.0037 P10.5 crx- retina GATGGGATGG (5) 1.9 0.0019 P10.5 crx+ retina TCTGTAATTG (2) 15.4 0.0154 P10.5 crx+ retina AACTTTGAGC (4) 3.8 0.0038 P10.5 crx+ retina ATTTAAAAAA (10) 1.9 0.0019 P10.5 crx+ retina GCCTGTGGTC (5) 1.9 0.0019 P10.5 crx+ retina GTTTCTAATA (3) 1.9 0.0019 P10.5 crx+ retina TCACTTCCTT (4) 1.9 0.0019 Adult retinal TCTGTAATTG (2) 35.2 0.0352 Adult retinal ATCAACATTG (2) 1.9 0.0019 Adult retinal CAGTTACAGA (7) 1.9 0.0019 Adult retinal GCCTGTGGTC (5) 1.9 0.0019 ONL TCTGTAATTG (2) 9.6 0.0096 ONL GATGGGATGG (5) 3.8 0.0038 ONL GCTCCAGCCT (3) 3.8 0.0038 ONL GTTTCTAATA (3) 3.8 0.0038 ONL TGATGTGCAT (3) 3.8 0.0038 ONL ATTTAAAAAA (10) 1.9 0.0019