Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.21814	9430079M16Rik	RIKEN cDNA 9430079M16 gene	6		109246
Gene Ontology	integral to membrane | integral to plasma membrane | membrane fraction
Human Homolog	NET-5[transmembrane 4 superfamily member tetraspan NET-5]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 71 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGAAGGGGGA (2) 9.8 0.0098 P8 Cb GC GCACAGGACA (5) 1.6 0.0016 P8 Cb GC GGCCCCAACT (2) 1.6 0.0016 P8 Cb GC TCCCTGCTAC 1.6 0.0016 P8 Cb GC TGTCAAAAGC 1.6 0.0016 Cb medulloblastoma TGTCAAAAGC 34.7 0.0347 Cb medulloblastoma TGAAGGGGGA (2) 20.8 0.0208 Cb medulloblastoma TGTCAAAGCA (3) 4.6 0.0046 Cb medulloblastoma GCTGCCCAGC (6) 2.3 0.0023 Cb medulloblastoma TAACCTCAAA (3) 2.3 0.0023 P8 GC+1d culture TGAAGGGGGA (2) 11.4 0.0114 P8 GC+1d culture TGTCAAAGCA (3) 4.6 0.0046 P8 GC+1d culture GAGGAGGGGA (12) 1.1 0.0011 P8 GC+1d culture GCTGCCCAGC (6) 1.1 0.0011 P8 GC+1d culture GGCCCCAACT (2) 1.1 0.0011 P8 GC+1d culture TGTCAAAAGC 1.1 0.0011 P8 GC+SHH+1d culture TGAAGGGGGA (2) 18.7 0.0187 P8 GC+SHH+1d culture TGTCAAAAGC 3.5 0.0035 P8 GC+SHH+1d culture GCACAGGACA (5) 1.2 0.0012 P8 GC+SHH+1d culture TCCCTGCTAC 1.2 0.0012 P8 GC+SHH+1d culture TGTCAAAGCA (3) 1.2 0.0012 3T3 fibroblasts TAACCTCAAA (3) 3.5 0.0035 3T3 fibroblasts TCCCTGCTAC 3.5 0.0035 E15 cortex TGAAGGGGGA (2) 19.8 0.0198 P1 cortex TGAAGGGGGA (2) 9.1 0.0091 Hypothalamus TGAAGGGGGA (2) 7.2 0.0072 Hypothalamus TGTCAAAAGC 3.6 0.0036 E12.5 retina TGAAGGGGGA (2) 22.5 0.0225 E12.5 retina GCTGCCCAGC (6) 3.8 0.0038 E12.5 retina GAGGAGGGGA (12) 1.9 0.0019 E12.5 retina TGTCAAAAGC 1.9 0.0019 E14.5 retina TGAAGGGGGA (2) 20 0.02 E14.5 retina TGTCAAAAGC 7.3 0.0073 E14.5 retina GCTGCCCAGC (6) 1.8 0.0018 E14.5 retina GGCCCCAACT (2) 1.8 0.0018 E16.5 retina TGAAGGGGGA (2) 14.5 0.0145 E16.5 retina TGTCAAAAGC 12.7 0.0127 E16.5 retina CTTAGGTCAG 1.8 0.0018 E16.5 retina GGCCCCAACT (2) 1.8 0.0018 E16.5 retina TGTCAAAGCA (3) 1.8 0.0018 E18.5 retina TGAAGGGGGA (2) 25.5 0.0255 E18.5 retina TGTCAAAAGC 7.3 0.0073 E18.5 retina GCACAGGACA (5) 1.8 0.0018 E18.5 retina GGCCCCAACT (2) 1.8 0.0018 E18.5 retina TGTCAAAGCA (3) 1.8 0.0018 P0.5 retina TGAAGGGGGA (2) 25.5 0.0255 P0.5 retina TGTCAAAAGC 5.9 0.0059 P0.5 retina CTTAGGTCAG 3.9 0.0039 P0.5 retina GTGTTCGTTA 2 0.002 P2.5 retina TGAAGGGGGA (2) 51 0.051 P2.5 retina TGTCAAAAGC 19.4 0.0194 P2.5 retina GAGGAGGGGA (12) 1.8 0.0018 P2.5 retina GCACAGGACA (5) 1.8 0.0018 P2.5 retina GCTGCCCAGC (6) 1.8 0.0018 P4.5 retina TGAAGGGGGA (2) 47.6 0.0476 P4.5 retina TGTCAAAAGC 19.8 0.0198 P4.5 retina GTGTTCGTTA 2 0.002 P6.5 retina TGAAGGGGGA (2) 28.3 0.0283 P6.5 retina TGTCAAAAGC 16.7 0.0167 P6.5 retina TAACCTCAAA (3) 1.7 0.0017 P6.5 retina TGTCAAAGCA (3) 1.7 0.0017 P10.5 crx- retina TGAAGGGGGA (2) 18.6 0.0186 P10.5 crx- retina TGTCAAAAGC 11.1 0.0111 P10.5 crx- retina GCACAGGACA (5) 1.9 0.0019 P10.5 crx+ retina TGAAGGGGGA (2) 28.8 0.0288 P10.5 crx+ retina TGTCAAAAGC 13.5 0.0135 P10.5 crx+ retina GCTGCCCAGC (6) 3.8 0.0038 P10.5 crx+ retina TGTCAAAGCA (3) 1.9 0.0019 Adult retinal TGAAGGGGGA (2) 16.7 0.0167 Adult retinal TGTCAAAAGC 3.7 0.0037 ONL TGAAGGGGGA (2) 5.7 0.0057