Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.218203	Ncstn	nicastrin	1	1 93.5 cM	59287
Gene Ontology	integral to membrane | protein processing
Human Homolog	NCSTN[nicastrin]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 52 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTAGTGTGGG (2) 3.3 0.0033 P8 Cb GC ACCTAAGGTC 1.6 0.0016 P8 Cb GC GTTCTGGTGG (7) 1.6 0.0016 Cb medulloblastoma ACCTAAGGTC 2.3 0.0023 P8 GC+1d culture TTAGTGTGGG (2) 12.6 0.0126 P8 GC+1d culture ACCTAAGGTC 1.1 0.0011 P8 GC+1d culture GAGAAGCTGA (7) 1.1 0.0011 P8 GC+1d culture TCTCAGAAAA (3) 1.1 0.0011 P8 GC+SHH+1d culture TTAGTGTGGG (2) 9.4 0.0094 P8 GC+SHH+1d culture ACCTAAGGTC 1.2 0.0012 3T3 fibroblasts TTAGTGTGGG (2) 3.5 0.0035 E15 cortex GAGGCACTTC (2) 4.9 0.0049 P1 cortex GAGAAGCTGA (7) 4.5 0.0045 P1 cortex TTAGTGTGGG (2) 4.5 0.0045 Hypothalamus TCTCAGAAAA (3) 5.4 0.0054 Hypothalamus ACCTAAGGTC 1.8 0.0018 Hypothalamus GAGAAGCTGA (7) 1.8 0.0018 E12.5 retina GTTCTGGTGG (7) 1.9 0.0019 E14.5 retina TCTCAGAAAA (3) 3.6 0.0036 E14.5 retina ACCTGTCTTC (2) 1.8 0.0018 E16.5 retina TCTCAGAAAA (3) 3.6 0.0036 E16.5 retina TTAGTGTGGG (2) 3.6 0.0036 E16.5 retina ATTACGCCAA (233) 1.8 0.0018 E16.5 retina GAGGCACTTC (2) 1.8 0.0018 E18.5 retina TTAGTGTGGG (2) 7.3 0.0073 E18.5 retina ACCTGTCTTC (2) 3.6 0.0036 E18.5 retina TCTCAGAAAA (3) 3.6 0.0036 P0.5 retina TTAGTGTGGG (2) 5.9 0.0059 P0.5 retina ACCTGTCTTC (2) 3.9 0.0039 P0.5 retina ATTACGCCAA (233) 2 0.002 P0.5 retina GTTCTGGTGG (7) 2 0.002 P2.5 retina TTAGTGTGGG (2) 5.3 0.0053 P2.5 retina GTTCTGGTGG (7) 1.8 0.0018 P4.5 retina TTAGTGTGGG (2) 4 0.004 P4.5 retina ACCTGTCTTC (2) 2 0.002 P6.5 retina TTAGTGTGGG (2) 6.7 0.0067 P6.5 retina ACCTGTCTTC (2) 1.7 0.0017 P6.5 retina GTTCTGGTGG (7) 1.7 0.0017 P10.5 crx- retina GTTCTGGTGG (7) 3.7 0.0037 P10.5 crx- retina TTAGTGTGGG (2) 1.9 0.0019 P10.5 crx+ retina TTAGTGTGGG (2) 5.8 0.0058 P10.5 crx+ retina GAGAAGCTGA (7) 1.9 0.0019 P10.5 crx+ retina GAGGCACTTC (2) 1.9 0.0019 P10.5 crx+ retina TCTCAGAAAA (3) 1.9 0.0019 Adult retinal TTAGTGTGGG (2) 5.6 0.0056 Adult retinal ATTACGCCAA (233) 3.7 0.0037 Adult retinal ACCTAAGGTC 1.9 0.0019 Adult retinal GTTCTGGTGG (7) 1.9 0.0019 ONL GAGGCACTTC (2) 3.8 0.0038 ONL TCTCAGAAAA (3) 3.8 0.0038 ONL GTTCTGGTGG (7) 1.9 0.0019 ONL TTAGTGTGGG (2) 1.9 0.0019