Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.218350
Fbxl20
F-box and leucine-rich repeat protein 20
11
72194
Mm.218350
AL117906
expressed sequence AL117906
11
404590
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 70 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGGTTGCTGG (
369
)
68.5
0.0685
P8 Cb GC
TTTTTTTTTT (
433
)
4.9
0.0049
P8 Cb GC
AACCAGCTGA (
5
)
3.3
0.0033
P8 Cb GC
AGAGACCACA (
3
)
3.3
0.0033
P8 Cb GC
TCTCTAAAAG
(
3
)
3.3
0.0033
P8 Cb GC
GATCTTTGTG (
4
)
1.6
0.0016
P8 Cb GC
TTTTGGAAAC (
4
)
1.6
0.0016
Cb medulloblastoma
TGGTTGCTGG (
369
)
113.3
0.1133
Cb medulloblastoma
TTTTTTTTTT (
433
)
2.3
0.0023
P8 GC+1d culture
TGGTTGCTGG (
369
)
57.1
0.0571
P8 GC+1d culture
TTTTTTTTTT (
433
)
13.7
0.0137
P8 GC+1d culture
AGAGACCACA (
3
)
4.6
0.0046
P8 GC+1d culture
GGCAGCCCCA (
4
)
1.1
0.0011
P8 GC+1d culture
TCTCTAAAAG
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
TGGTTGCTGG (
369
)
89
0.089
P8 GC+SHH+1d culture
TTTTTTTTTT (
433
)
5.9
0.0059
3T3 fibroblasts
TGGTTGCTGG (
369
)
220.8
0.2208
3T3 fibroblasts
AAAGCAGCCA (
6
)
3.5
0.0035
3T3 fibroblasts
AGCTTGAGAA (
3
)
3.5
0.0035
E15 cortex
TGGTTGCTGG (
369
)
277.1
0.2771
E15 cortex
AGAGACCACA (
3
)
9.9
0.0099
E15 cortex
AAAGCAGCCA (
6
)
4.9
0.0049
E15 cortex
AGCTTGAGAA (
3
)
4.9
0.0049
E15 cortex
GGCAGCCCCA (
4
)
4.9
0.0049
E15 cortex
TCTCTAAAAG
(
3
)
4.9
0.0049
E15 cortex
TTTTTTTTTT (
433
)
4.9
0.0049
P1 cortex
TGGTTGCTGG (
369
)
86.4
0.0864
P1 cortex
AGAGACCACA (
3
)
50
0.05
P1 cortex
TTTTTTTTTT (
433
)
4.5
0.0045
Hypothalamus
TGGTTGCTGG (
369
)
349.6
0.3496
Hypothalamus
TTTTTTTTTT (
433
)
7.2
0.0072
Hypothalamus
AACCAGCTGA (
5
)
3.6
0.0036
E12.5 retina
TGGTTGCTGG (
369
)
157.7
0.1577
E12.5 retina
TTTTTTTTTT (
433
)
7.5
0.0075
E12.5 retina
AACCAGCTGA (
5
)
1.9
0.0019
E14.5 retina
TGGTTGCTGG (
369
)
936.5
0.9365
E14.5 retina
TTTTTTTTTT (
433
)
23.7
0.0237
E16.5 retina
TGGTTGCTGG (
369
)
767.9
0.7679
E16.5 retina
TTTTTTTTTT (
433
)
5.4
0.0054
E16.5 retina
AACCAGCTGA (
5
)
3.6
0.0036
E18.5 retina
TGGTTGCTGG (
369
)
252.8
0.2528
E18.5 retina
TTTTTTTTTT (
433
)
10.9
0.0109
E18.5 retina
TCTCTAAAAG
(
3
)
1.8
0.0018
P0.5 retina
TGGTTGCTGG (
369
)
190.4
0.1904
P0.5 retina
TTTTTTTTTT (
433
)
9.8
0.0098
P0.5 retina
TTCACAGAGA
(
4
)
3.9
0.0039
P0.5 retina
TCTCTAAAAG
(
3
)
2
0.002
P0.5 retina
TTTTGGAAAC (
4
)
2
0.002
P2.5 retina
TGGTTGCTGG (
369
)
165.4
0.1654
P2.5 retina
TTTTTTTTTT (
433
)
7
0.007
P2.5 retina
GATCTTTGTG (
4
)
1.8
0.0018
P4.5 retina
TGGTTGCTGG (
369
)
150.6
0.1506
P4.5 retina
TTTTTTTTTT (
433
)
9.9
0.0099
P4.5 retina
AGCTTGAGAA (
3
)
2
0.002
P4.5 retina
TTCACAGAGA
(
4
)
2
0.002
P6.5 retina
TGGTTGCTGG (
369
)
156.7
0.1567
P6.5 retina
TTTTTTTTTT (
433
)
8.3
0.0083
P6.5 retina
TTCACAGAGA
(
4
)
5
0.005
P6.5 retina
TCTCTAAAAG
(
3
)
1.7
0.0017
P10.5 crx- retina
TGGTTGCTGG (
369
)
280.5
0.2805
P10.5 crx+ retina
TGGTTGCTGG (
369
)
101.9
0.1019
P10.5 crx+ retina
TTTTTTTTTT (
433
)
3.8
0.0038
P10.5 crx+ retina
GGCAGCCCCA (
4
)
1.9
0.0019
P10.5 crx+ retina
TTTTGGAAAC (
4
)
1.9
0.0019
Adult retinal
TGGTTGCTGG (
369
)
214.8
0.2148
Adult retinal
TTTTTTTTTT (
433
)
7.4
0.0074
Adult retinal
TTCACAGAGA
(
4
)
1.9
0.0019
ONL
TGGTTGCTGG (
369
)
398.4
0.3984
ONL
TTTTTTTTTT (
433
)
3.8
0.0038
ONL
AAAGCAGCCA (
6
)
1.9
0.0019
