Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.21841	Sfrs2	splicing factor, arginine/serine-rich 2 (SC-35)	11	11 73.0 cM	20382
Gene Ontology	DNA binding | mRNA splice site selection | nuclear mRNA splicing, via spliceosome | nucleus | protein binding | RNA binding | spliceosome complex | spliceosome complex
Human Homolog	SFRS2[splicing factor, arginine/serine-rich 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 190 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTAAGCAAAA (3) 130.5 0.1305 P8 Cb GC GTGTATCTTT (3) 40.8 0.0408 P8 Cb GC TACAGCCATT 8.2 0.0082 P8 Cb GC TTTTAAGTAC 4.9 0.0049 P8 Cb GC GAAGAGTCCT (5) 3.3 0.0033 P8 Cb GC GAAGATGGAG (7) 3.3 0.0033 P8 Cb GC GACCGATGGA 3.3 0.0033 P8 Cb GC CTGTTTGAGA (3) 1.6 0.0016 P8 Cb GC GGGAAAAAAA (36) 1.6 0.0016 P8 Cb GC GTGTATCTCT (4) 1.6 0.0016 P8 Cb GC GTGTTAAAAA (3) 1.6 0.0016 P8 Cb GC TGCACTTTGG (4) 1.6 0.0016 P8 Cb GC TGTATCTTTT (9) 1.6 0.0016 P8 Cb GC TTCGGATATA (2) 1.6 0.0016 Cb medulloblastoma GTAAGCAAAA (3) 219.7 0.2197 Cb medulloblastoma GGGAAAAAAA (36) 92.5 0.0925 Cb medulloblastoma GTGTATCTTT (3) 13.9 0.0139 P8 GC+1d culture GTAAGCAAAA (3) 141.6 0.1416 P8 GC+1d culture GTGTATCTTT (3) 29.7 0.0297 P8 GC+1d culture GAAGATGGAG (7) 10.3 0.0103 P8 GC+1d culture TACAGCCATT 2.3 0.0023 P8 GC+1d culture TTAATTTGTG (4) 2.3 0.0023 P8 GC+1d culture TTTAGGAAGC (2) 2.3 0.0023 P8 GC+1d culture CTGTTTGAGA (3) 1.1 0.0011 P8 GC+1d culture GGGAAAAAAA (36) 1.1 0.0011 P8 GC+1d culture GTGTATCTCT (4) 1.1 0.0011 P8 GC+1d culture TTCGGATATA (2) 1.1 0.0011 P8 GC+SHH+1d culture GTAAGCAAAA (3) 186.2 0.1862 P8 GC+SHH+1d culture GTGTATCTTT (3) 34 0.034 P8 GC+SHH+1d culture GAAGATGGAG (7) 9.4 0.0094 P8 GC+SHH+1d culture TTTTAAGTAC 4.7 0.0047 P8 GC+SHH+1d culture TGTATCTTTT (9) 2.3 0.0023 P8 GC+SHH+1d culture CTGTTTGAGA (3) 1.2 0.0012 P8 GC+SHH+1d culture GACCGATGGA 1.2 0.0012 P8 GC+SHH+1d culture GAGGAAGGAG (6) 1.2 0.0012 P8 GC+SHH+1d culture GGGAAAAAAA (36) 1.2 0.0012 P8 GC+SHH+1d culture GGGTATCTTT (2) 1.2 0.0012 P8 GC+SHH+1d culture GTGTATCTCT (4) 1.2 0.0012 P8 GC+SHH+1d culture TACAGCCATT 1.2 0.0012 P8 GC+SHH+1d culture TGCACTTTGG (4) 1.2 0.0012 P8 GC+SHH+1d culture TTCGGATATA (2) 1.2 0.0012 3T3 fibroblasts GAAGATGGAG (7) 21 0.021 3T3 fibroblasts TGCACTTTGG (4) 17.5 0.0175 3T3 fibroblasts GTGTATCTTT (3) 10.5 0.0105 3T3 fibroblasts GAAGAGTCCT (5) 7 0.007 3T3 fibroblasts GTAAGCAAAA (3) 7 0.007 3T3 fibroblasts GTTTCTGTAG (3) 3.5 0.0035 3T3 fibroblasts TACAGCCATT 3.5 0.0035 E15 cortex GTAAGCAAAA (3) 108.9 0.1089 E15 cortex GAAGATGGAG (7) 9.9 0.0099 E15 cortex GTGTATCTTT (3) 4.9 0.0049 P1 cortex GTAAGCAAAA (3) 45.5 0.0455 P1 cortex GTGTATCTTT (3) 13.6 0.0136 P1 cortex TTCGGATATA (2) 13.6 0.0136 P1 cortex GAAGATGGAG (7) 4.5 0.0045 P1 cortex GGGAAAAAAA (36) 4.5 0.0045 P1 cortex TTAATTTGTG (4) 4.5 0.0045 P1 cortex TTTTAATTAC (3) 4.5 0.0045 Hypothalamus GTAAGCAAAA (3) 152.1 0.1521 Hypothalamus GGGAAAAAAA (36) 41.7 0.0417 Hypothalamus GTGTATCTTT (3) 7.2 0.0072 Hypothalamus GAAGATGGAG (7) 3.6 0.0036 Hypothalamus GTGTTAAAAA (3) 3.6 0.0036 Hypothalamus CTGTTTGAGA (3) 1.8 0.0018 Hypothalamus GTTTCTGTAG (3) 1.8 0.0018 Hypothalamus TACAGCCATT 1.8 0.0018 Hypothalamus TGCACTTTGG (4) 1.8 0.0018 Hypothalamus TGTATCTTTT (9) 1.8 0.0018 Hypothalamus TTTAGGAAGC (2) 1.8 0.0018 E12.5 retina GTAAGCAAAA (3) 110.8 0.1108 E12.5 retina GTGTATCTTT (3) 63.8 0.0638 E12.5 retina GAAGATGGAG (7) 15 0.015 E12.5 retina GAAGAGTCCT (5) 3.8 0.0038 E12.5 retina GGGTATCTTT (2) 3.8 0.0038 E12.5 retina TGTATCTTTT (9) 3.8 0.0038 E12.5 retina TTCGGATATA (2) 3.8 0.0038 E12.5 retina GTGTTAAAAA (3) 1.9 0.0019 E12.5 retina TGCACTTTGG (4) 1.9 0.0019 E12.5 retina TTTTAAGTAC 1.9 0.0019 E14.5 retina GTAAGCAAAA (3) 122.1 0.1221 E14.5 retina GTGTATCTTT (3) 38.3 0.0383 E14.5 retina TGCACTTTGG (4) 7.3 0.0073 E14.5 retina TTTTAAGTAC 7.3 0.0073 E14.5 retina TACAGCCATT 5.5 0.0055 E14.5 retina TTCGGATATA (2) 5.5 0.0055 E14.5 retina TGTATCTTTT (9) 3.6 0.0036 E14.5 retina GAAGAGTCCT (5) 1.8 0.0018 E14.5 retina GAAGATGGAG (7) 1.8 0.0018 E14.5 retina GGGAAAAAAA (36) 1.8 0.0018 E14.5 retina GTGTTAAAAA (3) 1.8 0.0018 E16.5 retina GTAAGCAAAA (3) 135.8 0.1358 E16.5 retina GTGTATCTTT (3) 43.5 0.0435 E16.5 retina TGCACTTTGG (4) 10.9 0.0109 E16.5 retina TACAGCCATT 5.4 0.0054 E16.5 retina GGGAAAAAAA (36) 3.6 0.0036 E16.5 retina TTTAGGAAGC (2) 3.6 0.0036 E16.5 retina GAAGAGTCCT (5) 1.8 0.0018 E16.5 retina GAAGATGGAG (7) 1.8 0.0018 E16.5 retina GAGGAAGGAG (6) 1.8 0.0018 E16.5 retina TTCGGATATA (2) 1.8 0.0018 E16.5 retina TTTTAAGTAC 1.8 0.0018 E18.5 retina GTAAGCAAAA (3) 345.6 0.3456 E18.5 retina GTGTATCTTT (3) 61.8 0.0618 E18.5 retina TGCACTTTGG (4) 7.3 0.0073 E18.5 retina TTCGGATATA (2) 7.3 0.0073 E18.5 retina GAAGATGGAG (7) 5.5 0.0055 E18.5 retina CTGTTTGAGA (3) 3.6 0.0036 E18.5 retina GTTTCTGTAG (3) 3.6 0.0036 E18.5 retina GAAGAGTCCT (5) 1.8 0.0018 E18.5 retina GACCGATGGA 1.8 0.0018 E18.5 retina GGGAAAAAAA (36) 1.8 0.0018 E18.5 retina GTGTTAAAAA (3) 1.8 0.0018 E18.5 retina TACAGCCATT 1.8 0.0018 E18.5 retina TTTAGGAAGC (2) 1.8 0.0018 E18.5 retina TTTTAAGTAC 1.8 0.0018 P0.5 retina GTAAGCAAAA (3) 141.3 0.1413 P0.5 retina GTGTATCTTT (3) 45.1 0.0451 P0.5 retina GAAGATGGAG (7) 17.7 0.0177 P0.5 retina TACAGCCATT 7.9 0.0079 P0.5 retina TTCGGATATA (2) 7.9 0.0079 P0.5 retina TGCACTTTGG (4) 5.9 0.0059 P0.5 retina GGGAAAAAAA (36) 3.9 0.0039 P0.5 retina TTTAGGAAGC (2) 2 0.002 P2.5 retina GTAAGCAAAA (3) 234 0.234 P2.5 retina GTGTATCTTT (3) 70.4 0.0704 P2.5 retina GAAGATGGAG (7) 14.1 0.0141 P2.5 retina TGCACTTTGG (4) 8.8 0.0088 P2.5 retina GAAGAGTCCT (5) 7 0.007 P2.5 retina GGGAAAAAAA (36) 7 0.007 P2.5 retina TTCGGATATA (2) 7 0.007 P2.5 retina CTGTTTGAGA (3) 3.5 0.0035 P2.5 retina GTTTCTGTAG (3) 3.5 0.0035 P2.5 retina TACAGCCATT 3.5 0.0035 P2.5 retina TGTATCTTTT (9) 1.8 0.0018 P4.5 retina GTAAGCAAAA (3) 216 0.216 P4.5 retina GTGTATCTTT (3) 37.6 0.0376 P4.5 retina TTCGGATATA (2) 11.9 0.0119 P4.5 retina GGGAAAAAAA (36) 9.9 0.0099 P4.5 retina CTGTTTGAGA (3) 5.9 0.0059 P4.5 retina GAAGATGGAG (7) 4 0.004 P4.5 retina GTTTCTGTAG (3) 2 0.002 P4.5 retina TACAGCCATT 2 0.002 P4.5 retina TGCACTTTGG (4) 2 0.002 P4.5 retina TGTATCTTTT (9) 2 0.002 P6.5 retina GTAAGCAAAA (3) 163.4 0.1634 P6.5 retina GTGTATCTTT (3) 50 0.05 P6.5 retina GGGAAAAAAA (36) 20 0.02 P6.5 retina TTCGGATATA (2) 13.3 0.0133 P6.5 retina GAAGATGGAG (7) 3.3 0.0033 P6.5 retina TGTATCTTTT (9) 1.7 0.0017 P6.5 retina TTTAGGAAGC (2) 1.7 0.0017 P6.5 retina TTTTAATTAC (3) 1.7 0.0017 P10.5 crx- retina GTAAGCAAAA (3) 92.9 0.0929 P10.5 crx- retina GTGTATCTTT (3) 14.9 0.0149 P10.5 crx- retina GGGAAAAAAA (36) 11.1 0.0111 P10.5 crx- retina TTTAGGAAGC (2) 7.4 0.0074 P10.5 crx- retina TTCGGATATA (2) 3.7 0.0037 P10.5 crx- retina CTGTTTGAGA (3) 1.9 0.0019 P10.5 crx- retina GAAGAGTCCT (5) 1.9 0.0019 P10.5 crx- retina GACCGATGGA 1.9 0.0019 P10.5 crx- retina TACAGCCATT 1.9 0.0019 P10.5 crx- retina TTTTAATTAC (3) 1.9 0.0019 P10.5 crx+ retina GTAAGCAAAA (3) 155.7 0.1557 P10.5 crx+ retina GTGTATCTTT (3) 32.7 0.0327 P10.5 crx+ retina GGGAAAAAAA (36) 23.1 0.0231 P10.5 crx+ retina GAAGATGGAG (7) 3.8 0.0038 P10.5 crx+ retina TGTATCTTTT (9) 3.8 0.0038 P10.5 crx+ retina TTTAGGAAGC (2) 3.8 0.0038 P10.5 crx+ retina GTGTCTCTTT 1.9 0.0019 P10.5 crx+ retina TACAGCCATT 1.9 0.0019 P10.5 crx+ retina TTCGGATATA (2) 1.9 0.0019 P10.5 crx+ retina TTTTAAGTAC 1.9 0.0019 Adult retinal GTAAGCAAAA (3) 87 0.087 Adult retinal GGGAAAAAAA (36) 35.2 0.0352 Adult retinal GTGTATCTTT (3) 14.8 0.0148 Adult retinal CTGTTTGAGA (3) 3.7 0.0037 Adult retinal GAAGATGGAG (7) 3.7 0.0037 Adult retinal TTTAGGAAGC (2) 3.7 0.0037 Adult retinal TACAGCCATT 1.9 0.0019 Adult retinal TGCACTTTGG (4) 1.9 0.0019 Adult retinal TTAATTTGTG (4) 1.9 0.0019 Adult retinal TTCGGATATA (2) 1.9 0.0019 ONL GTAAGCAAAA (3) 78.5 0.0785 ONL GGGAAAAAAA (36) 30.6 0.0306 ONL GTGTATCTTT (3) 15.3 0.0153 ONL GAAGATGGAG (7) 5.7 0.0057 ONL GTGTCTCTTT 3.8 0.0038 ONL GAGGAAGGAG (6) 1.9 0.0019 ONL GTTTCTGTAG (3) 1.9 0.0019 ONL TACAGCCATT 1.9 0.0019