Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.218940
Mms19l
MMS19 (MET18 S. cerevisiae)-like
19
19 C3
72199
Mm.218940
B130065D12Rik
RIKEN cDNA B130065D12 gene
19
320104
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 9 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 45 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAGAGCCATC
(
3
)
3.3
0.0033
P8 Cb GC
AGTTCACCTG
(
2
)
1.6
0.0016
P8 Cb GC
TCTGTGGCCC
(
6
)
1.6
0.0016
Cb medulloblastoma
AGTTCACCTG
(
2
)
9.2
0.0092
Cb medulloblastoma
AAGAGCCATC
(
3
)
2.3
0.0023
Cb medulloblastoma
CTCAGAAGAT
(
5
)
2.3
0.0023
P8 GC+1d culture
AGTTCACCTG
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
AGTTCACCTG
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
AAGAGCCATC
(
3
)
1.2
0.0012
P8 GC+SHH+1d culture
CTCAGAAGAT
(
5
)
1.2
0.0012
P8 GC+SHH+1d culture
TGACGCTCTG (
10
)
1.2
0.0012
3T3 fibroblasts
AAGAGCCATC
(
3
)
10.5
0.0105
3T3 fibroblasts
AGTTCACCTG
(
2
)
3.5
0.0035
P1 cortex
AGTTCACCTG
(
2
)
4.5
0.0045
P1 cortex
TCTGTGGCCC
(
6
)
4.5
0.0045
Hypothalamus
AAGAGCCATC
(
3
)
1.8
0.0018
Hypothalamus
AGTTCACCTG
(
2
)
1.8
0.0018
Hypothalamus
CTCAGAAGAT
(
5
)
1.8
0.0018
Hypothalamus
TGACGCTCTG (
10
)
1.8
0.0018
E12.5 retina
AGTTCACCTG
(
2
)
5.6
0.0056
E14.5 retina
AGTTCACCTG
(
2
)
3.6
0.0036
E16.5 retina
AAGAGCCATC
(
3
)
5.4
0.0054
E16.5 retina
AGTTCACCTG
(
2
)
3.6
0.0036
E16.5 retina
CCGCTCCCCA
(
3
)
1.8
0.0018
E18.5 retina
CTCAGAAGAT
(
5
)
3.6
0.0036
E18.5 retina
AGTTCACCTG
(
2
)
1.8
0.0018
P0.5 retina
AGTTCACCTG
(
2
)
3.9
0.0039
P2.5 retina
AGTTCACCTG
(
2
)
8.8
0.0088
P4.5 retina
AGTTCACCTG
(
2
)
7.9
0.0079
P4.5 retina
AAGAGCCATC
(
3
)
4
0.004
P4.5 retina
CTCAGAAGAT
(
5
)
2
0.002
P6.5 retina
AGTTCACCTG
(
2
)
15
0.015
P6.5 retina
AAGAGCCATC
(
3
)
5
0.005
P10.5 crx- retina
AAGAGCCATC
(
3
)
3.7
0.0037
P10.5 crx- retina
AGTTCACCTG
(
2
)
1.9
0.0019
P10.5 crx- retina
CTCAGAAGAT
(
5
)
1.9
0.0019
P10.5 crx+ retina
AGTTCACCTG
(
2
)
11.5
0.0115
P10.5 crx+ retina
AAGAGCCATC
(
3
)
3.8
0.0038
P10.5 crx+ retina
CCGCTCCCCA
(
3
)
1.9
0.0019
P10.5 crx+ retina
CTCAGAAGAT
(
5
)
1.9
0.0019
Adult retinal
AGTTCACCTG
(
2
)
7.4
0.0074
Adult retinal
AAGAGCCATC
(
3
)
1.9
0.0019
Adult retinal
TCTGTGGCCC
(
6
)
1.9
0.0019
ONL
AGTTCACCTG
(
2
)
3.8
0.0038
ONL
CCGCTCCCCA
(
3
)
1.9
0.0019
