Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.219613	Trim8	tripartite motif protein 8	19		93679
Gene Ontology	intracellular | nucleus | protein binding | protein ubiquitination | ubiquitin ligase complex | ubiquitin-protein ligase activity | zinc ion binding
Human Homolog	TRIM8[tripartite motif-containing 8]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 44 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGCTGGAAGA (12) 3.3 0.0033 P8 Cb GC GGGGTGTGAA (2) 3.3 0.0033 P8 Cb GC GCGGCTGCGG (4) 1.6 0.0016 P8 Cb GC GCTGGAAGAA (3) 1.6 0.0016 Cb medulloblastoma GCTGGAAGAA (3) 2.3 0.0023 P8 GC+1d culture GCTGGAAGAA (3) 6.8 0.0068 P8 GC+1d culture CTCCCCCAGT 2.3 0.0023 P8 GC+1d culture GCGGCTGCGG (4) 2.3 0.0023 P8 GC+1d culture GGGGTGTGAA (2) 2.3 0.0023 P8 GC+1d culture GGCTGGAAGA (12) 1.1 0.0011 P8 GC+SHH+1d culture GCTGGAAGAA (3) 5.9 0.0059 P8 GC+SHH+1d culture GCGGCTGCGG (4) 2.3 0.0023 P8 GC+SHH+1d culture GGGGTGTGAA (2) 2.3 0.0023 3T3 fibroblasts GCTGGAAGAA (3) 7 0.007 3T3 fibroblasts GCGGCTGCGG (4) 3.5 0.0035 3T3 fibroblasts GGGGTGTGAA (2) 3.5 0.0035 E15 cortex GCTGGAAGAA (3) 4.9 0.0049 E15 cortex GGGGTGTGAA (2) 4.9 0.0049 P1 cortex GCTGGAAGAA (3) 9.1 0.0091 Hypothalamus GGGGTGTGAA (2) 3.6 0.0036 Hypothalamus GCTGGAAGAA (3) 1.8 0.0018 Hypothalamus TTACTGCTCT (2) 1.8 0.0018 E12.5 retina GGGGTGTGAA (2) 3.8 0.0038 E14.5 retina TTACTGCTCT (2) 1.8 0.0018 E16.5 retina GGGGTGTGAA (2) 3.6 0.0036 E18.5 retina GGCTGGAAGA (12) 1.8 0.0018 E18.5 retina GGGGTGTGAA (2) 1.8 0.0018 P0.5 retina GCTGGAAGAA (3) 5.9 0.0059 P2.5 retina GCGGCTGCGG (4) 1.8 0.0018 P2.5 retina GGGGTGTGAA (2) 1.8 0.0018 P4.5 retina GGGGTGTGAA (2) 4 0.004 P4.5 retina CTCCCCCAGT 2 0.002 P4.5 retina GCTGGAAGAA (3) 2 0.002 P6.5 retina GCTGGAAGAA (3) 3.3 0.0033 P6.5 retina GGCTGGAAGA (12) 1.7 0.0017 P6.5 retina TTACTGCTCT (2) 1.7 0.0017 P10.5 crx- retina GCTGGAAGAA (3) 1.9 0.0019 P10.5 crx- retina GGGGTGTGAA (2) 1.9 0.0019 P10.5 crx+ retina GGGGTGTGAA (2) 3.8 0.0038 Adult retinal CTCCCCCAGT 1.9 0.0019 Adult retinal GCTGGAAGAA (3) 1.9 0.0019 Adult retinal GGCTGGAAGA (12) 1.9 0.0019 Adult retinal TTACTGCTCT (2) 1.9 0.0019 ONL GCGGCTGCGG (4) 1.9 0.0019