Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.220224	Gria2	glutamate receptor, ionotropic, AMPA2 (alpha 2)	3	3 33.6 cM	14800
Gene Ontology	glutamate-gated ion channel activity | inotropic glutamate receptor activity | integral to membrane | ion channel activity | ion transport | membrane | membrane fraction | potassium channel activity | potassium ion transport | protein binding | receptor activity | synaptic transmission | transport | transporter activity
Human Homolog	GRIA2[glutamate receptor, ionotropic, AMPA 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 65 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CACTGCTTTG (2) 1.6 0.0016 P8 Cb GC GAAGTACTAT 1.6 0.0016 P8 Cb GC GAGCTCAAAA (3) 1.6 0.0016 P8 Cb GC GTATCAGTTC 1.6 0.0016 Cb medulloblastoma GTATCAGTTC 4.6 0.0046 Cb medulloblastoma GAAGTACTAT 2.3 0.0023 Cb medulloblastoma GAGCTCAAAA (3) 2.3 0.0023 P8 GC+1d culture GAGCTCAAAA (3) 11.4 0.0114 P8 GC+1d culture GAAGTACTAT 2.3 0.0023 P8 GC+1d culture GTATCAGTTC 2.3 0.0023 P8 GC+1d culture CACTGCTTTG (2) 1.1 0.0011 P8 GC+1d culture CTTTCTGCTC (8) 1.1 0.0011 P8 GC+1d culture TATTCTGTGC (2) 1.1 0.0011 P8 GC+SHH+1d culture GAGCTCAAAA (3) 8.2 0.0082 P8 GC+SHH+1d culture GAAGTACTAT 2.3 0.0023 P8 GC+SHH+1d culture CTTTCTGCTC (8) 1.2 0.0012 P8 GC+SHH+1d culture GTATCAGTTC 1.2 0.0012 E15 cortex ATATTGCCAG (2) 9.9 0.0099 E15 cortex CTTTCTGCTC (8) 4.9 0.0049 E15 cortex GAGCTCAAAA (3) 4.9 0.0049 E15 cortex TATTCTGTGC (2) 4.9 0.0049 P1 cortex ACACTTTCTT 13.6 0.0136 P1 cortex GAAGTACTAT 13.6 0.0136 P1 cortex ATATTGCCAG (2) 9.1 0.0091 P1 cortex CTTTCTGCTC (8) 4.5 0.0045 P1 cortex GACCATTTTC 4.5 0.0045 P1 cortex GAGCTCAAAA (3) 4.5 0.0045 P1 cortex GTATCAGTTC 4.5 0.0045 Hypothalamus GAAGTACTAT 3.6 0.0036 Hypothalamus CTTTCTGCTC (8) 1.8 0.0018 Hypothalamus GACCATTTTC 1.8 0.0018 E12.5 retina GAGCTCAAAA (3) 1.9 0.0019 E14.5 retina GAAGTACTAT 1.8 0.0018 E16.5 retina ATCAAGAAGC (2) 7.2 0.0072 E16.5 retina CTTTCTGCTC (8) 3.6 0.0036 E16.5 retina GAGCTCAAAA (3) 3.6 0.0036 E18.5 retina CTTTCTGCTC (8) 1.8 0.0018 E18.5 retina TATTCTGTGC (2) 1.8 0.0018 P0.5 retina GAGCTCAAAA (3) 13.7 0.0137 P0.5 retina GAAGTACTAT 2 0.002 P2.5 retina GAGCTCAAAA (3) 5.3 0.0053 P2.5 retina CTTTCTGCTC (8) 3.5 0.0035 P2.5 retina GAAGTACTAT 1.8 0.0018 P4.5 retina GAGCTCAAAA (3) 5.9 0.0059 P4.5 retina GTATCAGTTC 5.9 0.0059 P4.5 retina CTTTCTGCTC (8) 4 0.004 P4.5 retina GAAGTACTAT 2 0.002 P4.5 retina GACCATTTTC 2 0.002 P6.5 retina GAGCTCAAAA (3) 5 0.005 P6.5 retina ATATTGCCAG (2) 1.7 0.0017 P6.5 retina CTTTCTGCTC (8) 1.7 0.0017 P10.5 crx- retina GAAGTACTAT 7.4 0.0074 P10.5 crx- retina GTATCAGTTC 3.7 0.0037 P10.5 crx- retina CACTGCTTTG (2) 1.9 0.0019 P10.5 crx- retina CTTTCTGCTC (8) 1.9 0.0019 P10.5 crx- retina TATTCTGTGC (2) 1.9 0.0019 P10.5 crx+ retina GAAGTACTAT 3.8 0.0038 P10.5 crx+ retina GAGCTCAAAA (3) 1.9 0.0019 P10.5 crx+ retina GTATCAGTTC 1.9 0.0019 Adult retinal GAGCTCAAAA (3) 11.1 0.0111 Adult retinal GAAGTACTAT 3.7 0.0037 Adult retinal GTATCAGTTC 3.7 0.0037 Adult retinal ATCAAGAAGC (2) 1.9 0.0019 Adult retinal CACTGCTTTG (2) 1.9 0.0019 ONL GTATCAGTTC 1.9 0.0019