Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.22031	Cstf2t	cleavage stimulation factor, 3' pre-RNA subunit 2, tau	19		83410
Gene Ontology	cellular_component unknown | mRNA polyadenylation | nucleic acid binding | protein binding | RNA binding
Human Homolog	CSTF2T[cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 50 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTGGAGCAG (2) 6.5 0.0065 P8 Cb GC AAGCAGATGA (7) 1.6 0.0016 P8 Cb GC CAGGGGGCAG (2) 1.6 0.0016 P8 Cb GC TCATATCTAG 1.6 0.0016 Cb medulloblastoma CCTGGAGCAG (2) 13.9 0.0139 Cb medulloblastoma AAGCAGATGA (7) 2.3 0.0023 Cb medulloblastoma CAGGGGGCAG (2) 2.3 0.0023 Cb medulloblastoma CTGCCTCCCG 2.3 0.0023 Cb medulloblastoma TCTGCACTTT (3) 2.3 0.0023 P8 GC+1d culture CCTGGAGCAG (2) 11.4 0.0114 P8 GC+1d culture TCATATCTAG 3.4 0.0034 P8 GC+1d culture TCTGCACTTT (3) 3.4 0.0034 P8 GC+1d culture CTGCCTCCCG 1.1 0.0011 P8 GC+SHH+1d culture CCTGGAGCAG (2) 8.2 0.0082 P8 GC+SHH+1d culture TCTGCACTTT (3) 4.7 0.0047 P8 GC+SHH+1d culture CTGCCTCCCG 2.3 0.0023 P8 GC+SHH+1d culture TCATATCTAG 1.2 0.0012 3T3 fibroblasts TCTGCACTTT (3) 3.5 0.0035 E15 cortex AAGCAGATGA (7) 4.9 0.0049 E15 cortex TCTGCACTTT (3) 4.9 0.0049 P1 cortex CCTGGAGCAG (2) 18.2 0.0182 P1 cortex TCATATCTAG 4.5 0.0045 Hypothalamus CCTGGAGCAG (2) 3.6 0.0036 E12.5 retina CCTGGAGCAG (2) 5.6 0.0056 E14.5 retina CCTGGAGCAG (2) 3.6 0.0036 E14.5 retina TCATATCTAG 1.8 0.0018 E16.5 retina CCTGGAGCAG (2) 7.2 0.0072 E18.5 retina CCTGGAGCAG (2) 10.9 0.0109 E18.5 retina CAGGGGGCAG (2) 1.8 0.0018 P0.5 retina CCTGGAGCAG (2) 5.9 0.0059 P0.5 retina TCTGCACTTT (3) 3.9 0.0039 P2.5 retina CCTGGAGCAG (2) 3.5 0.0035 P2.5 retina TCATATCTAG 1.8 0.0018 P2.5 retina TCTGCACTTT (3) 1.8 0.0018 P4.5 retina CCTGGAGCAG (2) 11.9 0.0119 P4.5 retina TCTGCACTTT (3) 2 0.002 P6.5 retina CCTGGAGCAG (2) 16.7 0.0167 P6.5 retina TCTGCACTTT (3) 5 0.005 P6.5 retina CAGGGGGCAG (2) 1.7 0.0017 P10.5 crx- retina CCTGGAGCAG (2) 16.7 0.0167 P10.5 crx- retina AAGCAGATGA (7) 1.9 0.0019 P10.5 crx- retina TCATATCTAG 1.9 0.0019 P10.5 crx+ retina CCTGGAGCAG (2) 23.1 0.0231 P10.5 crx+ retina AAGCAGATGA (7) 1.9 0.0019 Adult retinal CCTGGAGCAG (2) 13 0.013 Adult retinal TCATATCTAG 7.4 0.0074 Adult retinal AAGCAGATGA (7) 1.9 0.0019 Adult retinal TCTGCACTTT (3) 1.9 0.0019 ONL TCATATCTAG 1.9 0.0019 ONL TCTGCACTTT (3) 1.9 0.0019