Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.220329	A230052E19Rik	RIKEN cDNA A230052E19 gene	2		241424
Gene Ontology	integral to membrane | ion channel activity | ion transport | transport | voltage-gated ion channel activity
Human Homolog	SCN3A[sodium channel, voltage-gated, type III, alpha]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 28 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTGCAGTTTT (3) 1.6 0.0016 Cb medulloblastoma GAATGGAAAC (5) 6.9 0.0069 Cb medulloblastoma CGGGAAAATG (3) 4.6 0.0046 Cb medulloblastoma CTGCAGTTTT (3) 4.6 0.0046 Cb medulloblastoma TGGGTCAGTA 4.6 0.0046 P8 GC+1d culture CTGCAGTTTT (3) 2.3 0.0023 P8 GC+SHH+1d culture CTGCAGTTTT (3) 2.3 0.0023 P8 GC+SHH+1d culture GAATGGAAAC (5) 1.2 0.0012 E15 cortex GCTTCCAATC (2) 14.8 0.0148 P1 cortex GAATGGAAAC (5) 4.5 0.0045 P1 cortex GCTTCCAATC (2) 4.5 0.0045 P1 cortex TGGGTCAGTA 4.5 0.0045 Hypothalamus GAATGGAAAC (5) 1.8 0.0018 Hypothalamus GCTTCCAATC (2) 1.8 0.0018 E12.5 retina CTGCAGTTTT (3) 1.9 0.0019 E12.5 retina GAATGGAAAC (5) 1.9 0.0019 E14.5 retina CTGCAGTTTT (3) 5.5 0.0055 E16.5 retina CTGCAGTTTT (3) 1.8 0.0018 E18.5 retina CTGCAGTTTT (3) 1.8 0.0018 P2.5 retina CTGCAGTTTT (3) 1.8 0.0018 P4.5 retina CTGCAGTTTT (3) 4 0.004 P4.5 retina CGGGAAAATG (3) 2 0.002 P4.5 retina GCTTCCAATC (2) 2 0.002 P6.5 retina GAATGGAAAC (5) 1.7 0.0017 P10.5 crx- retina CTGCAGTTTT (3) 5.6 0.0056 P10.5 crx+ retina GAATGGAAAC (5) 1.9 0.0019 Adult retinal CTGCAGTTTT (3) 3.7 0.0037 Adult retinal GCTTCCAATC (2) 1.9 0.0019