Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.22061	Sema4a	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A	3		20351
Gene Ontology	development | extracellular space | integral to membrane | membrane | neurogenesis | receptor activity
Human Homolog	SEMA4A[sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 36 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCTTATTTTT (2) 3.3 0.0033 Cb medulloblastoma GCTGCCCAGC (6) 2.3 0.0023 P8 GC+1d culture GAGTCTCCTG (7) 1.1 0.0011 P8 GC+1d culture GCTGCCCAGC (6) 1.1 0.0011 P8 GC+1d culture TCTTATTTTT (2) 1.1 0.0011 P8 GC+SHH+1d culture TCTTATTTTT (2) 4.7 0.0047 P8 GC+SHH+1d culture CCCCCCATCC (7) 1.2 0.0012 P8 GC+SHH+1d culture GAGTCTCCTG (7) 1.2 0.0012 E15 cortex GAGTCTCCTG (7) 4.9 0.0049 P1 cortex CCATACTGTT 4.5 0.0045 Hypothalamus CCATACTGTT 1.8 0.0018 E12.5 retina GAGTCTCCTG (7) 5.6 0.0056 E12.5 retina GCTGCCCAGC (6) 3.8 0.0038 E12.5 retina TCTTATTTTT (2) 1.9 0.0019 E14.5 retina GAGTCTCCTG (7) 3.6 0.0036 E14.5 retina CCCCCCATCC (7) 1.8 0.0018 E14.5 retina GCTGCCCAGC (6) 1.8 0.0018 E16.5 retina CCATACTGTT 1.8 0.0018 E16.5 retina CCCCCCATCC (7) 1.8 0.0018 E18.5 retina GAGTCTCCTG (7) 9.1 0.0091 P0.5 retina GAGTCTCCTG (7) 7.9 0.0079 P2.5 retina GAGTCTCCTG (7) 5.3 0.0053 P2.5 retina TCTTATTTTT (2) 3.5 0.0035 P2.5 retina CCCCCCATCC (7) 1.8 0.0018 P2.5 retina GCTGCCCAGC (6) 1.8 0.0018 P4.5 retina CCCCCCATCC (7) 4 0.004 P4.5 retina TCTTATTTTT (2) 2 0.002 P6.5 retina GAGTCTCCTG (7) 5 0.005 P10.5 crx- retina CCCCCCATCC (7) 5.6 0.0056 P10.5 crx- retina GAGTCTCCTG (7) 1.9 0.0019 P10.5 crx+ retina CCCCCCATCC (7) 3.8 0.0038 P10.5 crx+ retina GCTGCCCAGC (6) 3.8 0.0038 P10.5 crx+ retina GAGTCTCCTG (7) 1.9 0.0019 Adult retinal CCCCCCATCC (7) 3.7 0.0037 Adult retinal GAGTCTCCTG (7) 3.7 0.0037 ONL GAGTCTCCTG (7) 1.9 0.0019