Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.220922
Rragc
Ras-related GTP binding C
4
54170
Mm.220922
4930535I16Rik
RIKEN cDNA 4930535I16 gene
4
75220
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 80 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CAGGCAAAAC (
40
)
11.4
0.0114
P8 Cb GC
GTGCTGGACC (
4
)
11.4
0.0114
P8 Cb GC
GACCACGGTG
(
3
)
6.5
0.0065
P8 Cb GC
ACCACCAGGG (
6
)
1.6
0.0016
Cb medulloblastoma
GACCACGGTG
(
3
)
11.6
0.0116
Cb medulloblastoma
CAGGCAAAAC (
40
)
4.6
0.0046
Cb medulloblastoma
GTGCTGGACC (
4
)
4.6
0.0046
Cb medulloblastoma
CCTTGACGGA
(
2
)
2.3
0.0023
P8 GC+1d culture
GTGCTGGACC (
4
)
21.7
0.0217
P8 GC+1d culture
GACCACGGTG
(
3
)
9.1
0.0091
P8 GC+1d culture
CAGGCAAAAC (
40
)
5.7
0.0057
P8 GC+1d culture
ATTGATGTTG
(
4
)
2.3
0.0023
P8 GC+1d culture
ACCACCAGGG (
6
)
1.1
0.0011
P8 GC+SHH+1d culture
GTGCTGGACC (
4
)
22.2
0.0222
P8 GC+SHH+1d culture
CAGGCAAAAC (
40
)
11.7
0.0117
P8 GC+SHH+1d culture
GACCACGGTG
(
3
)
5.9
0.0059
P8 GC+SHH+1d culture
ACCACCAGGG (
6
)
3.5
0.0035
P8 GC+SHH+1d culture
AGGATAGATG
(
4
)
1.2
0.0012
3T3 fibroblasts
GTGCTGGACC (
4
)
21
0.021
3T3 fibroblasts
ACCACCAGGG (
6
)
10.5
0.0105
3T3 fibroblasts
CAGGCAAAAC (
40
)
10.5
0.0105
3T3 fibroblasts
GACCACGGTG
(
3
)
3.5
0.0035
E15 cortex
GTGCTGGACC (
4
)
14.8
0.0148
E15 cortex
CAGGCAAAAC (
40
)
4.9
0.0049
E15 cortex
GACCACGGTG
(
3
)
4.9
0.0049
P1 cortex
CAGGCAAAAC (
40
)
9.1
0.0091
P1 cortex
GTGCTGGACC (
4
)
4.5
0.0045
Hypothalamus
CAGGCAAAAC (
40
)
5.4
0.0054
Hypothalamus
GTGCTGGACC (
4
)
5.4
0.0054
Hypothalamus
GACCACGGTG
(
3
)
3.6
0.0036
Hypothalamus
ACCACCAGGG (
6
)
1.8
0.0018
Hypothalamus
CCTTGACGGA
(
2
)
1.8
0.0018
E12.5 retina
CAGGCAAAAC (
40
)
20.7
0.0207
E12.5 retina
GTGCTGGACC (
4
)
7.5
0.0075
E12.5 retina
ACCACCAGGG (
6
)
5.6
0.0056
E12.5 retina
GACCACGGTG
(
3
)
3.8
0.0038
E14.5 retina
CAGGCAAAAC (
40
)
12.8
0.0128
E14.5 retina
GACCACGGTG
(
3
)
12.8
0.0128
E14.5 retina
GTGCTGGACC (
4
)
5.5
0.0055
E14.5 retina
ATTGATGTTG
(
4
)
1.8
0.0018
E16.5 retina
GTGCTGGACC (
4
)
10.9
0.0109
E16.5 retina
CAGGCAAAAC (
40
)
9.1
0.0091
E16.5 retina
GACCACGGTG
(
3
)
5.4
0.0054
E18.5 retina
CAGGCAAAAC (
40
)
12.7
0.0127
E18.5 retina
GTGCTGGACC (
4
)
5.5
0.0055
E18.5 retina
GACCACGGTG
(
3
)
3.6
0.0036
P0.5 retina
CAGGCAAAAC (
40
)
13.7
0.0137
P0.5 retina
GTGCTGGACC (
4
)
3.9
0.0039
P0.5 retina
ACCACCAGGG (
6
)
2
0.002
P0.5 retina
CCTTGACGGA
(
2
)
2
0.002
P0.5 retina
GACCACGGTG
(
3
)
2
0.002
P2.5 retina
CAGGCAAAAC (
40
)
24.6
0.0246
P2.5 retina
GACCACGGTG
(
3
)
10.6
0.0106
P2.5 retina
GTGCTGGACC (
4
)
5.3
0.0053
P2.5 retina
ACCACCAGGG (
6
)
1.8
0.0018
P4.5 retina
CAGGCAAAAC (
40
)
13.9
0.0139
P4.5 retina
GACCACGGTG
(
3
)
5.9
0.0059
P4.5 retina
ACCACCAGGG (
6
)
2
0.002
P4.5 retina
GTGCTGGACC (
4
)
2
0.002
P6.5 retina
CAGGCAAAAC (
40
)
16.7
0.0167
P6.5 retina
GACCACGGTG
(
3
)
10
0.01
P6.5 retina
ATTGATGTTG
(
4
)
3.3
0.0033
P6.5 retina
GTGCTGGACC (
4
)
3.3
0.0033
P6.5 retina
ACCACCAGGG (
6
)
1.7
0.0017
P10.5 crx- retina
CAGGCAAAAC (
40
)
11.1
0.0111
P10.5 crx- retina
GACCACGGTG
(
3
)
9.3
0.0093
P10.5 crx- retina
GTGCTGGACC (
4
)
7.4
0.0074
P10.5 crx+ retina
CAGGCAAAAC (
40
)
13.5
0.0135
P10.5 crx+ retina
GTGCTGGACC (
4
)
9.6
0.0096
P10.5 crx+ retina
ACCACCAGGG (
6
)
3.8
0.0038
P10.5 crx+ retina
AGGATAGATG
(
4
)
1.9
0.0019
P10.5 crx+ retina
GACCACGGTG
(
3
)
1.9
0.0019
Adult retinal
CAGGCAAAAC (
40
)
11.1
0.0111
Adult retinal
GACCACGGTG
(
3
)
9.3
0.0093
Adult retinal
GTGCTGGACC (
4
)
3.7
0.0037
Adult retinal
ACCACCAGGG (
6
)
1.9
0.0019
Adult retinal
AGGATAGATG
(
4
)
1.9
0.0019
ONL
CAGGCAAAAC (
40
)
34.5
0.0345
ONL
GACCACGGTG
(
3
)
3.8
0.0038
ONL
GTGCTGGACC (
4
)
1.9
0.0019
