Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.221041	E130008O17Rik	RIKEN cDNA E130008O17 gene	1		320518
Mm.221041	R3hdm	R3H domain (binds single-stranded nucleic acids)	1		226412
Human Homolog	R3HDM[R3H domain (binds single-stranded nucleic acids) containing]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 71 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGAAGGGTTA (4) 4.9 0.0049 P8 Cb GC AACTCCCTCC (4) 1.6 0.0016 P8 Cb GC AAGAAGAAGG (12) 1.6 0.0016 Cb medulloblastoma AACTCCCTCC (4) 2.3 0.0023 Cb medulloblastoma AAGAAGAAGG (12) 2.3 0.0023 Cb medulloblastoma CCTGCCCTCT (4) 2.3 0.0023 P8 GC+1d culture AACTCCCTCC (4) 3.4 0.0034 P8 GC+1d culture AAGAAGAAGG (12) 2.3 0.0023 P8 GC+1d culture GGAAGGGTTA (4) 2.3 0.0023 P8 GC+1d culture TCAAAACTAT (4) 2.3 0.0023 P8 GC+1d culture TGATTATGTG (2) 2.3 0.0023 P8 GC+1d culture AAATAAAACT (4) 1.1 0.0011 P8 GC+1d culture AGGATACTGA (5) 1.1 0.0011 P8 GC+1d culture CCTGCCCTCT (4) 1.1 0.0011 P8 GC+SHH+1d culture GGAAGGGTTA (4) 7 0.007 P8 GC+SHH+1d culture TCAAAACTAT (4) 2.3 0.0023 P8 GC+SHH+1d culture AAATAAAACT (4) 1.2 0.0012 P8 GC+SHH+1d culture AACTCCCTCC (4) 1.2 0.0012 P8 GC+SHH+1d culture AAGAAGAAGG (12) 1.2 0.0012 P8 GC+SHH+1d culture AGGATACTGA (5) 1.2 0.0012 P8 GC+SHH+1d culture TGATTATGTG (2) 1.2 0.0012 P8 GC+SHH+1d culture TTAAGGAAGA (4) 1.2 0.0012 3T3 fibroblasts AACTCCCTCC (4) 3.5 0.0035 E15 cortex GGAAGGGTTA (4) 9.9 0.0099 E15 cortex CCTGCCCTCT (4) 4.9 0.0049 P1 cortex TCAAAACTAT (4) 9.1 0.0091 P1 cortex AACTCCCTCC (4) 4.5 0.0045 P1 cortex GGAAGGGTTA (4) 4.5 0.0045 Hypothalamus TTAAGGAAGA (4) 7.2 0.0072 Hypothalamus TGATTATGTG (2) 3.6 0.0036 Hypothalamus AACTCCCTCC (4) 1.8 0.0018 Hypothalamus AGGATACTGA (5) 1.8 0.0018 Hypothalamus TCAAAACTAT (4) 1.8 0.0018 E12.5 retina AACTCCCTCC (4) 1.9 0.0019 E12.5 retina AGGATACTGA (5) 1.9 0.0019 E12.5 retina TGATTATGTG (2) 1.9 0.0019 E14.5 retina TCAAAACTAT (4) 3.6 0.0036 E14.5 retina AACTCCCTCC (4) 1.8 0.0018 E14.5 retina GGAAGGGTTA (4) 1.8 0.0018 E16.5 retina AACTCCCTCC (4) 5.4 0.0054 E16.5 retina AAATAAAACT (4) 1.8 0.0018 E16.5 retina AGGATACTGA (5) 1.8 0.0018 E16.5 retina GGAAGGGTTA (4) 1.8 0.0018 E16.5 retina TCAAAACTAT (4) 1.8 0.0018 E16.5 retina TTAAGGAAGA (4) 1.8 0.0018 E18.5 retina AACTCCCTCC (4) 1.8 0.0018 E18.5 retina TTAAGGAAGA (4) 1.8 0.0018 P0.5 retina AACTCCCTCC (4) 7.9 0.0079 P0.5 retina GGAAGGGTTA (4) 3.9 0.0039 P0.5 retina CCTGCCCTCT (4) 2 0.002 P0.5 retina TCAAAACTAT (4) 2 0.002 P0.5 retina TGATTATGTG (2) 2 0.002 P2.5 retina AACTCCCTCC (4) 1.8 0.0018 P2.5 retina AAGAAGAAGG (12) 1.8 0.0018 P2.5 retina AGGATACTGA (5) 1.8 0.0018 P2.5 retina TGATTATGTG (2) 1.8 0.0018 P4.5 retina AACTCCCTCC (4) 9.9 0.0099 P4.5 retina AAATAAAACT (4) 5.9 0.0059 P6.5 retina AAATAAAACT (4) 1.7 0.0017 P6.5 retina AACTCCCTCC (4) 1.7 0.0017 P10.5 crx- retina GGAAGGGTTA (4) 9.3 0.0093 P10.5 crx- retina AACTCCCTCC (4) 3.7 0.0037 P10.5 crx- retina CCTGCCCTCT (4) 1.9 0.0019 P10.5 crx- retina TCAAAACTAT (4) 1.9 0.0019 P10.5 crx- retina TTAAGGAAGA (4) 1.9 0.0019 P10.5 crx+ retina AACTCCCTCC (4) 3.8 0.0038 P10.5 crx+ retina AGGATACTGA (5) 1.9 0.0019 Adult retinal AACTCCCTCC (4) 7.4 0.0074 Adult retinal GGAAGGGTTA (4) 1.9 0.0019 ONL AAGAAGAAGG (12) 3.8 0.0038 ONL AACTCCCTCC (4) 1.9 0.0019