Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.22109	2610204L23Rik	RIKEN cDNA 2610204L23 gene	11	11 E1	67163
Mm.22109	D13Mgi22	DNA Segment, Chr 13, Mouse Genome Informatics 22	13		97906
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 14 In Situ Hybridization Images

Images -- Click to Enlarge

SAGE Tags

Total 87 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTTTTAACA (3) 4.9 0.0049 P8 Cb GC AAATTTCTAG (3) 1.6 0.0016 P8 Cb GC GAGGAGCTGA (8) 1.6 0.0016 P8 Cb GC GCTTTGTGTA (4) 1.6 0.0016 P8 Cb GC GGAGAAGTCA (4) 1.6 0.0016 P8 Cb GC TACACAGTAG (5) 1.6 0.0016 Cb medulloblastoma GCTTTGTGTA (4) 2.3 0.0023 Cb medulloblastoma TTTTTTAACA (3) 2.3 0.0023 P8 GC+1d culture GCTTTGTGTA (4) 3.4 0.0034 P8 GC+1d culture CAGGTGATAC (2) 2.3 0.0023 P8 GC+1d culture GGAAGAAGAC (7) 2.3 0.0023 P8 GC+1d culture TTTTTTAACA (3) 2.3 0.0023 P8 GC+1d culture ATACAATCTG (3) 1.1 0.0011 P8 GC+1d culture GAGGAGCTGA (8) 1.1 0.0011 P8 GC+1d culture TACACAGTAG (5) 1.1 0.0011 P8 GC+SHH+1d culture GCTTTGTGTA (4) 3.5 0.0035 P8 GC+SHH+1d culture TTTTTTAACA (3) 3.5 0.0035 P8 GC+SHH+1d culture AAAGGGCTCT (5) 1.2 0.0012 P8 GC+SHH+1d culture GAGGAGCTGA (8) 1.2 0.0012 P8 GC+SHH+1d culture TAGAGCTGGT (2) 1.2 0.0012 P8 GC+SHH+1d culture TGAAAAATCC (4) 1.2 0.0012 3T3 fibroblasts AAAGGGCTCT (5) 3.5 0.0035 3T3 fibroblasts GCTTTGTGTA (4) 3.5 0.0035 E15 cortex GAGGAGCTGA (8) 9.9 0.0099 E15 cortex GCTTTGTGTA (4) 4.9 0.0049 P1 cortex GCTTTGTGTA (4) 4.5 0.0045 Hypothalamus ATACAATCTG (3) 3.6 0.0036 Hypothalamus AAATTTCTAG (3) 1.8 0.0018 Hypothalamus TACACAGTAG (5) 1.8 0.0018 Hypothalamus TAGAGCTGGT (2) 1.8 0.0018 E12.5 retina AAATTTCTAG (3) 3.8 0.0038 E12.5 retina AAAGGGCTCT (5) 1.9 0.0019 E12.5 retina GAGGAGCTGA (8) 1.9 0.0019 E12.5 retina TTTTTTAACA (3) 1.9 0.0019 E14.5 retina GAAGATTCTG (4) 3.6 0.0036 E14.5 retina TAGAGCTGGT (2) 3.6 0.0036 E14.5 retina GCTTTGTGTA (4) 1.8 0.0018 E14.5 retina GGAAGAAGAC (7) 1.8 0.0018 E14.5 retina GGAGAAGTCA (4) 1.8 0.0018 E14.5 retina TACACAGTAG (5) 1.8 0.0018 E16.5 retina TACACAGTAG (5) 1.8 0.0018 E18.5 retina AAATTTCTAG (3) 1.8 0.0018 E18.5 retina ATACAATCTG (3) 1.8 0.0018 E18.5 retina GAGGAGCTGA (8) 1.8 0.0018 E18.5 retina TTTTTTAACA (3) 1.8 0.0018 P0.5 retina TACACAGTAG (5) 3.9 0.0039 P0.5 retina TTTTTTAACA (3) 3.9 0.0039 P0.5 retina GCTTTGTGTA (4) 2 0.002 P0.5 retina TAGAGCTGGT (2) 2 0.002 P2.5 retina GCTTTGTGTA (4) 3.5 0.0035 P2.5 retina TTTTTTAACA (3) 3.5 0.0035 P2.5 retina AGGCGGAAGC (3) 1.8 0.0018 P2.5 retina GAGGAGCTGA (8) 1.8 0.0018 P2.5 retina TACACAGTAG (5) 1.8 0.0018 P2.5 retina TAGAGCTGGT (2) 1.8 0.0018 P4.5 retina TTTTTTAACA (3) 7.9 0.0079 P4.5 retina AGGCGGAACG (4) 2 0.002 P4.5 retina GAGGAGCTGA (8) 2 0.002 P4.5 retina GCTTTGTGTA (4) 2 0.002 P6.5 retina AGGCGGAACG (4) 3.3 0.0033 P6.5 retina GCTTTGTGTA (4) 3.3 0.0033 P6.5 retina TTTTTTAACA (3) 3.3 0.0033 P6.5 retina TACACAGTAG (5) 1.7 0.0017 P6.5 retina TGAAAAATCC (4) 1.7 0.0017 P10.5 crx- retina AGGCGGAACG (4) 14.9 0.0149 P10.5 crx- retina AAATTTCTAG (3) 3.7 0.0037 P10.5 crx- retina CAGGTGATAC (2) 1.9 0.0019 P10.5 crx- retina GAAGATTCTG (4) 1.9 0.0019 P10.5 crx- retina GCTTTGTGTA (4) 1.9 0.0019 P10.5 crx- retina TAGAGCTGGT (2) 1.9 0.0019 P10.5 crx+ retina AGGCGGAACG (4) 13.5 0.0135 P10.5 crx+ retina TTTTTTAACA (3) 9.6 0.0096 P10.5 crx+ retina AAATTTCTAG (3) 1.9 0.0019 P10.5 crx+ retina GAGGAGCTGA (8) 1.9 0.0019 P10.5 crx+ retina GCTTTGTGTA (4) 1.9 0.0019 P10.5 crx+ retina TACACAGTAG (5) 1.9 0.0019 Adult retinal AGGCGGAACG (4) 9.3 0.0093 Adult retinal GAGGAGCTGA (8) 1.9 0.0019 Adult retinal TACACAGTAG (5) 1.9 0.0019 Adult retinal TGAAAAATCC (4) 1.9 0.0019 Adult retinal TTTTTTAACA (3) 1.9 0.0019 ONL GCTTTGTGTA (4) 3.8 0.0038 ONL AGGCGGAACG (4) 1.9 0.0019 ONL GAGGAGCTGA (8) 1.9 0.0019 ONL GGAGAAGTCA (4) 1.9 0.0019 ONL TGAAAAATCC (4) 1.9 0.0019 ONL TTTTTTAACA (3) 1.9 0.0019