Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.221298	AI854770	expressed sequence AI854770	15		105930
Mm.221298	Arf3	ADP-ribosylation factor 3	15		11842
Gene Ontology	Golgi apparatus | GTP binding | protein transport | small GTPase mediated signal transduction
Human Homolog	ARF3[ADP-ribosylation factor 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 94 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGAGAACAAT (5) 6.5 0.0065 P8 Cb GC TAGACTCTTG (7) 4.9 0.0049 P8 Cb GC TACAGTCTAC (8) 3.3 0.0033 P8 Cb GC AAATAAAGTG (5) 1.6 0.0016 P8 Cb GC CTGCTCCAGA (6) 1.6 0.0016 P8 Cb GC CTTTTTTTCT (9) 1.6 0.0016 P8 Cb GC TTTAATAACT (2) 1.6 0.0016 Cb medulloblastoma TGAGCGTGTG (5) 4.6 0.0046 Cb medulloblastoma AAGCTGTCAC (4) 2.3 0.0023 Cb medulloblastoma AGAGAACAAT (5) 2.3 0.0023 Cb medulloblastoma CTTTTTTTCT (9) 2.3 0.0023 Cb medulloblastoma GCAGGATGTG (3) 2.3 0.0023 Cb medulloblastoma TACAGTCTAC (8) 2.3 0.0023 Cb medulloblastoma TTTAATAACT (2) 2.3 0.0023 P8 GC+1d culture AGAGAACAAT (5) 8 0.008 P8 GC+1d culture TTTAATAACT (2) 5.7 0.0057 P8 GC+1d culture TAGACTCTTG (7) 3.4 0.0034 P8 GC+1d culture AAATAAAGTG (5) 1.1 0.0011 P8 GC+1d culture CTATAAAGTT (4) 1.1 0.0011 P8 GC+1d culture GCAGGATGTG (3) 1.1 0.0011 P8 GC+1d culture GCTGGATGTG (5) 1.1 0.0011 P8 GC+1d culture TAGAGGGTGA (3) 1.1 0.0011 P8 GC+1d culture TGTGTATGTG (9) 1.1 0.0011 P8 GC+SHH+1d culture AGAGAACAAT (5) 8.2 0.0082 P8 GC+SHH+1d culture ATGGCGCCTC (4) 4.7 0.0047 P8 GC+SHH+1d culture TACAGTCTAC (8) 4.7 0.0047 P8 GC+SHH+1d culture TTTAATAACT (2) 2.3 0.0023 P8 GC+SHH+1d culture AAGCTGTCAC (4) 1.2 0.0012 P8 GC+SHH+1d culture CCCAGCAAGC (5) 1.2 0.0012 P8 GC+SHH+1d culture CTTTTTTTCT (9) 1.2 0.0012 P8 GC+SHH+1d culture GGGGTGCCAG (2) 1.2 0.0012 P8 GC+SHH+1d culture TAGACTCTTG (7) 1.2 0.0012 P8 GC+SHH+1d culture TAGAGGGTGA (3) 1.2 0.0012 3T3 fibroblasts GCTGAGCTGG (9) 10.5 0.0105 3T3 fibroblasts ATGGCGCCTC (4) 7 0.007 P1 cortex TTTAATAACT (2) 13.6 0.0136 Hypothalamus GACTGGGGGT (10) 5.4 0.0054 Hypothalamus GGGGTGCCAG (2) 5.4 0.0054 Hypothalamus TACAGTCTAC (8) 5.4 0.0054 Hypothalamus TTTAATAACT (2) 3.6 0.0036 Hypothalamus CCCAGCAAGC (5) 1.8 0.0018 Hypothalamus CTGCTCCAGA (6) 1.8 0.0018 Hypothalamus CTTTTTTTCT (9) 1.8 0.0018 E12.5 retina ATGGCGCCTC (4) 1.9 0.0019 E12.5 retina GCTGGATGTG (5) 1.9 0.0019 E12.5 retina TACAGTCTAC (8) 1.9 0.0019 E12.5 retina TAGACTCTTG (7) 1.9 0.0019 E14.5 retina TAGACTCTTG (7) 1.8 0.0018 E14.5 retina TAGAGGGTGA (3) 1.8 0.0018 E14.5 retina TTTAATAACT (2) 1.8 0.0018 E16.5 retina TTTAATAACT (2) 5.4 0.0054 E16.5 retina CTATAAAGTT (4) 1.8 0.0018 E16.5 retina CTTTTTTTCT (9) 1.8 0.0018 E16.5 retina GCTGAGCTGG (9) 1.8 0.0018 E18.5 retina TAGACTCTTG (7) 3.6 0.0036 E18.5 retina AGAGAACAAT (5) 1.8 0.0018 E18.5 retina CCCAGCAAGC (5) 1.8 0.0018 E18.5 retina TTTAATAACT (2) 1.8 0.0018 P0.5 retina ATGGCGCCTC (4) 3.9 0.0039 P0.5 retina GCTGAGCTGG (9) 2 0.002 P0.5 retina TTTAATAACT (2) 2 0.002 P2.5 retina TACAGTCTAC (8) 3.5 0.0035 P2.5 retina TTTAATAACT (2) 3.5 0.0035 P2.5 retina GCTGAGCTGG (9) 1.8 0.0018 P2.5 retina TAGACTCTTG (7) 1.8 0.0018 P2.5 retina TAGAGGGTGA (3) 1.8 0.0018 P2.5 retina TTAATAACTG (5) 1.8 0.0018 P4.5 retina TTTAATAACT (2) 7.9 0.0079 P4.5 retina TAGAGGGTGA (3) 5.9 0.0059 P4.5 retina AAATAAAGTG (5) 2 0.002 P4.5 retina AGAGAACAAT (5) 2 0.002 P4.5 retina CTTTTTTTCT (9) 2 0.002 P6.5 retina TACAGTCTAC (8) 3.3 0.0033 P6.5 retina CTTTTTTTCT (9) 1.7 0.0017 P6.5 retina TGTGTATGTG (9) 1.7 0.0017 P10.5 crx- retina CTTTTTTTCT (9) 7.4 0.0074 P10.5 crx- retina AAGCTGTCAC (4) 1.9 0.0019 P10.5 crx- retina CTATAAAGTT (4) 1.9 0.0019 P10.5 crx- retina GCTGGATGTG (5) 1.9 0.0019 P10.5 crx- retina TACAGTCTAC (8) 1.9 0.0019 P10.5 crx- retina TTAATAACTG (5) 1.9 0.0019 P10.5 crx+ retina TTTAATAACT (2) 3.8 0.0038 P10.5 crx+ retina AAGCTGTCAC (4) 1.9 0.0019 P10.5 crx+ retina ATGGCGCCTC (4) 1.9 0.0019 P10.5 crx+ retina CTATAAAGTT (4) 1.9 0.0019 P10.5 crx+ retina CTGCTCCAGA (6) 1.9 0.0019 P10.5 crx+ retina TACAGTCTAC (8) 1.9 0.0019 P10.5 crx+ retina TAGAGGGTGA (3) 1.9 0.0019 P10.5 crx+ retina TGTGTATGTG (9) 1.9 0.0019 Adult retinal TGTGTATGTG (9) 3.7 0.0037 Adult retinal TGAGCGTGTG (5) 1.9 0.0019 ONL GCAGGATGTG (3) 1.9 0.0019 ONL TGTGTATGTG (9) 1.9 0.0019 ONL TTAATAACTG (5) 1.9 0.0019