Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.2214
Sept4
septin 4
11
11 C
18952
Gene Ontology
cell cycle
|
GTP binding
Human Homolog
PNUTL2[peanut-like 2 (Drosophila)]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 5 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 72 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAAAAAAAA (
658
)
203.9
0.2039
P8 Cb GC
TGGACACTCA (
3
)
14.7
0.0147
P8 Cb GC
ACCCGGCTAG
9.8
0.0098
P8 Cb GC
AAAGCCCTGC (
7
)
1.6
0.0016
P8 Cb GC
AAGCTTGGCT
(
3
)
1.6
0.0016
P8 Cb GC
AAGGCCCTGC
(
5
)
1.6
0.0016
P8 Cb GC
GGGCAAGCTT
1.6
0.0016
Cb medulloblastoma
AAAAAAAAAA (
658
)
797.8
0.7978
Cb medulloblastoma
TGGACACTCA (
3
)
76.3
0.0763
Cb medulloblastoma
ACCCGGCTAG
34.7
0.0347
Cb medulloblastoma
GGGCAAGCTT
6.9
0.0069
P8 GC+1d culture
AAAAAAAAAA (
658
)
204.3
0.2043
P8 GC+1d culture
ACCCGGCTAG
11.4
0.0114
P8 GC+1d culture
TGGACACTCA (
3
)
11.4
0.0114
P8 GC+SHH+1d culture
AAAAAAAAAA (
658
)
278.7
0.2787
P8 GC+SHH+1d culture
TGGACACTCA (
3
)
15.2
0.0152
P8 GC+SHH+1d culture
ACCCGGCTAG
4.7
0.0047
3T3 fibroblasts
AAAAAAAAAA (
658
)
28
0.028
3T3 fibroblasts
TGGACACTCA (
3
)
3.5
0.0035
E15 cortex
AAAAAAAAAA (
658
)
212.8
0.2128
E15 cortex
AAGGCCCTGC
(
5
)
4.9
0.0049
E15 cortex
TGGACACTCA (
3
)
4.9
0.0049
P1 cortex
AAAAAAAAAA (
658
)
245.4
0.2454
P1 cortex
TGGACACTCA (
3
)
18.2
0.0182
P1 cortex
AAGGCCCTGC
(
5
)
9.1
0.0091
Hypothalamus
TGGACACTCA (
3
)
177.5
0.1775
Hypothalamus
AAAAAAAAAA (
658
)
123.2
0.1232
Hypothalamus
ACCCGGCTAG
12.7
0.0127
Hypothalamus
AAGCTTGGCT
(
3
)
1.8
0.0018
Hypothalamus
GGGCAAGCTT
1.8
0.0018
Hypothalamus
GTGGCGGAGA
1.8
0.0018
E12.5 retina
AAAAAAAAAA (
658
)
138.9
0.1389
E12.5 retina
TGGACACTCA (
3
)
5.6
0.0056
E12.5 retina
ACCCGGCTAG
1.9
0.0019
E12.5 retina
GTGGCGGAGA
1.9
0.0019
E14.5 retina
AAAAAAAAAA (
658
)
94.7
0.0947
E14.5 retina
GTGGCGGAGA
5.5
0.0055
E14.5 retina
TGGACACTCA (
3
)
5.5
0.0055
E16.5 retina
AAAAAAAAAA (
658
)
43.5
0.0435
E16.5 retina
TGGACACTCA (
3
)
14.5
0.0145
E16.5 retina
AAAGCCCTGC (
7
)
1.8
0.0018
E16.5 retina
GTGGCGGAGA
1.8
0.0018
E18.5 retina
AAAAAAAAAA (
658
)
374.7
0.3747
E18.5 retina
TGGACACTCA (
3
)
16.4
0.0164
E18.5 retina
AAGCTTGGCT
(
3
)
1.8
0.0018
E18.5 retina
GTGGCGGAGA
1.8
0.0018
P0.5 retina
AAAAAAAAAA (
658
)
117.8
0.1178
P0.5 retina
TGGACACTCA (
3
)
11.8
0.0118
P0.5 retina
GTGGCGGAGA
2
0.002
P2.5 retina
AAAAAAAAAA (
658
)
329.1
0.3291
P2.5 retina
TGGACACTCA (
3
)
10.6
0.0106
P2.5 retina
ACCCGGCTAG
1.8
0.0018
P4.5 retina
AAAAAAAAAA (
658
)
283.3
0.2833
P4.5 retina
TGGACACTCA (
3
)
17.8
0.0178
P6.5 retina
AAAAAAAAAA (
658
)
266.8
0.2668
P6.5 retina
TGGACACTCA (
3
)
13.3
0.0133
P6.5 retina
ACCCGGCTAG
6.7
0.0067
P6.5 retina
AAGCTTGGCT
(
3
)
1.7
0.0017
P10.5 crx- retina
AAAAAAAAAA (
658
)
44.6
0.0446
P10.5 crx- retina
TGGACACTCA (
3
)
33.4
0.0334
P10.5 crx- retina
ACCCGGCTAG
13
0.013
P10.5 crx- retina
AAAGCCCTGC (
7
)
1.9
0.0019
P10.5 crx+ retina
AAAAAAAAAA (
658
)
96.1
0.0961
P10.5 crx+ retina
TGGACACTCA (
3
)
15.4
0.0154
P10.5 crx+ retina
ACCCGGCTAG
13.5
0.0135
Adult retinal
AAAAAAAAAA (
658
)
57.4
0.0574
Adult retinal
TGGACACTCA (
3
)
18.5
0.0185
Adult retinal
ACCCGGCTAG
13
0.013
Adult retinal
GTGGCGGAGA
1.9
0.0019
ONL
AAAAAAAAAA (
658
)
103.4
0.1034
ONL
TGGACACTCA (
3
)
7.7
0.0077
ONL
ACCCGGCTAG
5.7
0.0057
