Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.2215	Tcof1	Treacher Collins Franceschetti syndrome 1, homolog	18	18 32.0 cM	21453
Gene Ontology	nucleus | transport
Human Homolog	TCOF1[Treacher Collins-Franceschetti syndrome 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 36 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTATCTGCAG 1.6 0.0016 Cb medulloblastoma TTATCTGCAG 2.3 0.0023 P8 GC+1d culture TTATCTGCAG 3.4 0.0034 P8 GC+1d culture AGAGCATTAA (8) 1.1 0.0011 P8 GC+1d culture CCCAGCCCCT (3) 1.1 0.0011 P8 GC+SHH+1d culture AGAGCATTAA (8) 1.2 0.0012 E15 cortex ACTTCCAAGG 9.9 0.0099 E12.5 retina CCCAGCCCCT (3) 5.6 0.0056 E12.5 retina AGAGCATTAA (8) 3.8 0.0038 E12.5 retina TTATCTGCAG 3.8 0.0038 E12.5 retina GGTGCAGTGG (6) 1.9 0.0019 E14.5 retina TCACGTAGCA 3.6 0.0036 E14.5 retina ACTTCCAAGG 1.8 0.0018 E14.5 retina TTATCTGCAG 1.8 0.0018 E16.5 retina ACTTCCAAGG 1.8 0.0018 E16.5 retina GGTGCAGTGG (6) 1.8 0.0018 E16.5 retina TCACGTAGCA 1.8 0.0018 E16.5 retina TTATCTGCAG 1.8 0.0018 E18.5 retina AGAGCATTAA (8) 3.6 0.0036 P0.5 retina CCCAGCCCCT (3) 2 0.002 P0.5 retina GGTGCAGTGG (6) 2 0.002 P0.5 retina TCACGTAGCA 2 0.002 P0.5 retina TTATCTGCAG 2 0.002 P2.5 retina GAGGGAGGTC (2) 1.8 0.0018 P4.5 retina TTATCTGCAG 5.9 0.0059 P4.5 retina CCCAGCCCCT (3) 2 0.002 P4.5 retina GAGGGAGGTC (2) 2 0.002 P6.5 retina TTATCTGCAG 1.7 0.0017 P10.5 crx- retina GGTGCAGTGG (6) 5.6 0.0056 P10.5 crx- retina TTATCTGCAG 3.7 0.0037 P10.5 crx- retina CCCAGCCCCT (3) 1.9 0.0019 P10.5 crx+ retina GGTGCAGTGG (6) 3.8 0.0038 Adult retinal GGTGCAGTGG (6) 1.9 0.0019 ONL CCCAGCCCCT (3) 1.9 0.0019 ONL GAGGGAGGTC (2) 1.9 0.0019 ONL TTATCTGCAG 1.9 0.0019