Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.222584	Pygb	brain glycogen phosphorylase	2	2 84.0 cM	110078
Gene Ontology	carbohydrate metabolism | catalytic activity | glycogen metabolism | phosphorylase activity | transferase activity | transferase activity, transferring glycosyl groups
Human Homolog	PYGB[phosphorylase, glycogen; brain]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 105 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTGCTGTACC (4) 13.1 0.0131 P8 Cb GC ACCACCCTTC 4.9 0.0049 P8 Cb GC TAAGACTATT (2) 3.3 0.0033 P8 Cb GC TTTTCCACTT (5) 3.3 0.0033 P8 Cb GC CCCACCCCCA (2) 1.6 0.0016 P8 Cb GC GGTGAACTGG (8) 1.6 0.0016 P8 Cb GC GTGGGGAAAA (7) 1.6 0.0016 Cb medulloblastoma ACCACCCTTC 11.6 0.0116 Cb medulloblastoma CTGCTGTACC (4) 9.2 0.0092 Cb medulloblastoma GGTGAACTGG (8) 4.6 0.0046 Cb medulloblastoma TTTTCCACTT (5) 4.6 0.0046 Cb medulloblastoma GTGGGGAAAA (7) 2.3 0.0023 P8 GC+1d culture CTGCTGTACC (4) 18.3 0.0183 P8 GC+1d culture CCCACCCCCA (2) 9.1 0.0091 P8 GC+1d culture GGTGAACTGG (8) 6.8 0.0068 P8 GC+1d culture TTTTCCACTT (5) 5.7 0.0057 P8 GC+1d culture TAAGACTATT (2) 3.4 0.0034 P8 GC+1d culture ACCACCCTTC 1.1 0.0011 P8 GC+SHH+1d culture CTGCTGTACC (4) 19.9 0.0199 P8 GC+SHH+1d culture TTTTCCACTT (5) 12.9 0.0129 P8 GC+SHH+1d culture ACCACCCTTC 2.3 0.0023 P8 GC+SHH+1d culture CCCACCCCCA (2) 1.2 0.0012 P8 GC+SHH+1d culture GTGGGGAAAG (10) 1.2 0.0012 3T3 fibroblasts GGTGAACTGG (8) 3.5 0.0035 E15 cortex GGTGAACTGG (8) 14.8 0.0148 E15 cortex TTTTCCACTT (5) 4.9 0.0049 P1 cortex CTGCTGTACC (4) 9.1 0.0091 P1 cortex ACCACCCTTC 4.5 0.0045 P1 cortex GGTGAACTGG (8) 4.5 0.0045 P1 cortex TTTTCCACTT (5) 4.5 0.0045 Hypothalamus CCCACCCCCA (2) 7.2 0.0072 Hypothalamus CTGCTGTACC (4) 3.6 0.0036 Hypothalamus TTTTCCACTT (5) 3.6 0.0036 Hypothalamus ACCACCCTTC 1.8 0.0018 Hypothalamus GGTGAACTGG (8) 1.8 0.0018 Hypothalamus TAAGACTATT (2) 1.8 0.0018 E12.5 retina CTGCTGTACC (4) 18.8 0.0188 E12.5 retina ACCACCCTTC 11.3 0.0113 E12.5 retina TTTTCCACTT (5) 9.4 0.0094 E12.5 retina CCTCTAGCCA 1.9 0.0019 E12.5 retina GGTGAACTGG (8) 1.9 0.0019 E12.5 retina GTGGGGAAAG (10) 1.9 0.0019 E14.5 retina CTGCTGTACC (4) 27.3 0.0273 E14.5 retina ACCACCCTTC 5.5 0.0055 E14.5 retina GGTGAACTGG (8) 5.5 0.0055 E14.5 retina TTTTCCACTT (5) 3.6 0.0036 E14.5 retina GTGGGGAAAA (7) 1.8 0.0018 E14.5 retina TAAGACTATT (2) 1.8 0.0018 E16.5 retina CTGCTGTACC (4) 65.2 0.0652 E16.5 retina TTTTCCACTT (5) 3.6 0.0036 E16.5 retina ACCACCCTTC 1.8 0.0018 E16.5 retina CCCACCCCCA (2) 1.8 0.0018 E16.5 retina CCTCTAGCCA 1.8 0.0018 E16.5 retina TAAGACTATT (2) 1.8 0.0018 E18.5 retina CTGCTGTACC (4) 20 0.02 E18.5 retina ACCACCCTTC 5.5 0.0055 E18.5 retina GGTGAACTGG (8) 5.5 0.0055 E18.5 retina CCCACCCCCA (2) 3.6 0.0036 E18.5 retina TTTTCCACTT (5) 3.6 0.0036 P0.5 retina CTGCTGTACC (4) 31.4 0.0314 P0.5 retina ACCACCCTTC 5.9 0.0059 P0.5 retina TTTTCCACTT (5) 5.9 0.0059 P0.5 retina GGTGAACTGG (8) 3.9 0.0039 P2.5 retina CTGCTGTACC (4) 40.5 0.0405 P2.5 retina GGTGAACTGG (8) 10.6 0.0106 P2.5 retina TTTTCCACTT (5) 7 0.007 P2.5 retina ACCACCCTTC 1.8 0.0018 P2.5 retina CCCACCCCCA (2) 1.8 0.0018 P2.5 retina GTGGGGAAAA (7) 1.8 0.0018 P4.5 retina CTGCTGTACC (4) 29.7 0.0297 P4.5 retina TTTTCCACTT (5) 5.9 0.0059 P4.5 retina ACCACCCTTC 2 0.002 P4.5 retina GGTGAACTGG (8) 2 0.002 P4.5 retina TAAGACTATT (2) 2 0.002 P6.5 retina CTGCTGTACC (4) 21.7 0.0217 P6.5 retina ACCACCCTTC 5 0.005 P6.5 retina TTTTCCACTT (5) 5 0.005 P6.5 retina CCCACCCCCA (2) 3.3 0.0033 P6.5 retina CCTCTAGCCA 1.7 0.0017 P6.5 retina GGTGAACTGG (8) 1.7 0.0017 P6.5 retina GTGGGGAAAA (7) 1.7 0.0017 P6.5 retina TAAGACTATT (2) 1.7 0.0017 P10.5 crx- retina CTGCTGTACC (4) 48.3 0.0483 P10.5 crx- retina TAAGACTATT (2) 5.6 0.0056 P10.5 crx- retina GGTGAACTGG (8) 3.7 0.0037 P10.5 crx- retina TTTTCCACTT (5) 3.7 0.0037 P10.5 crx- retina ACCACCCTTC 1.9 0.0019 P10.5 crx- retina GTGGGGAAAA (7) 1.9 0.0019 P10.5 crx+ retina CTGCTGTACC (4) 23.1 0.0231 P10.5 crx+ retina CCCACCCCCA (2) 1.9 0.0019 P10.5 crx+ retina GGTGAACTGG (8) 1.9 0.0019 P10.5 crx+ retina GTGGGGAAAA (7) 1.9 0.0019 P10.5 crx+ retina TAAGACTATT (2) 1.9 0.0019 Adult retinal CTGCTGTACC (4) 9.3 0.0093 Adult retinal TTTTCCACTT (5) 7.4 0.0074 Adult retinal CCCACCCCCA (2) 3.7 0.0037 Adult retinal GGTGAACTGG (8) 3.7 0.0037 Adult retinal ACCACCCTTC 1.9 0.0019 Adult retinal GTGGGGAAAA (7) 1.9 0.0019 Adult retinal GTGGGGAAAG (10) 1.9 0.0019 ONL CTGCTGTACC (4) 7.7 0.0077 ONL TTTTCCACTT (5) 5.7 0.0057 ONL TAAGACTATT (2) 3.8 0.0038 ONL GGTGAACTGG (8) 1.9 0.0019 ONL GTGGGGAAAG (10) 1.9 0.0019