Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.222825	Txndc7	thioredoxin domain containing 7	12		71853
Gene Ontology	arsenate reductase (thioredoxin) activity | calcium ion binding | electron transport | endoplasmic reticulum | extracellular space | isomerase activity | protein disulfide isomerase activity
Human Homolog	TXNDC7[thioredoxin domain containing 7 (protein disulfide isomerase)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 100 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CGGCCACTGG (4) 13.1 0.0131 P8 Cb GC GTGTGGTCAC (3) 4.9 0.0049 P8 Cb GC GGCTCGCCTG (2) 1.6 0.0016 Cb medulloblastoma TGGCCACTGG (9) 4.6 0.0046 Cb medulloblastoma CGGCCACTGG (4) 2.3 0.0023 Cb medulloblastoma GTGTGGTCAC (3) 2.3 0.0023 Cb medulloblastoma TCCTGGAGTC (4) 2.3 0.0023 P8 GC+1d culture CGGCCACTGG (4) 16 0.016 P8 GC+1d culture CAGACAACCC (3) 1.1 0.0011 P8 GC+1d culture GGCTCGCCTG (2) 1.1 0.0011 P8 GC+1d culture TGGCCACTGG (9) 1.1 0.0011 P8 GC+SHH+1d culture CGGCCACTGG (4) 12.9 0.0129 P8 GC+SHH+1d culture GTGTGGTCAC (3) 7 0.007 P8 GC+SHH+1d culture AGCTCTGGGC (5) 1.2 0.0012 P8 GC+SHH+1d culture CAGACAAACA (3) 1.2 0.0012 P8 GC+SHH+1d culture GGCTCGCCTG (2) 1.2 0.0012 P8 GC+SHH+1d culture GTAATAAATG (4) 1.2 0.0012 P8 GC+SHH+1d culture TCCTGGAGTC (4) 1.2 0.0012 P8 GC+SHH+1d culture TGCTGCTCAG (5) 1.2 0.0012 3T3 fibroblasts CGGCCACTGG (4) 38.6 0.0386 3T3 fibroblasts CAGACAAACA (3) 7 0.007 3T3 fibroblasts GTGTGGTCAC (3) 7 0.007 3T3 fibroblasts GTGGGCCGAA (4) 3.5 0.0035 E15 cortex CGGCCACTGG (4) 4.9 0.0049 E15 cortex GGCTCGCCTG (2) 4.9 0.0049 E15 cortex GTGTGGTCAC (3) 4.9 0.0049 P1 cortex CGGCCACTGG (4) 4.5 0.0045 Hypothalamus CGGCCACTGG (4) 12.7 0.0127 Hypothalamus TTGCTGTGAC (6) 3.6 0.0036 Hypothalamus CAGACAACCC (3) 1.8 0.0018 Hypothalamus CCCCCGCCCG (2) 1.8 0.0018 Hypothalamus GCAGCCATCA (5) 1.8 0.0018 Hypothalamus TCCTGGAGTC (4) 1.8 0.0018 Hypothalamus TGGCCACTGG (9) 1.8 0.0018 E12.5 retina CGGCCACTGG (4) 15 0.015 E12.5 retina GTGTGGTCAC (3) 5.6 0.0056 E12.5 retina TCCTGGAGTC (4) 3.8 0.0038 E12.5 retina GGCTCGCCTG (2) 1.9 0.0019 E14.5 retina CGGCCACTGG (4) 7.3 0.0073 E14.5 retina CAGACAAACA (3) 1.8 0.0018 E14.5 retina GCAGCCATCA (5) 1.8 0.0018 E14.5 retina GTAATAAATG (4) 1.8 0.0018 E14.5 retina GTGGGCCGAA (4) 1.8 0.0018 E14.5 retina TCCTGGAGTC (4) 1.8 0.0018 E14.5 retina TGCTGCTCAG (5) 1.8 0.0018 E16.5 retina CGGCCACTGG (4) 9.1 0.0091 E16.5 retina TGCTGCTCAG (5) 3.6 0.0036 E16.5 retina GTGGGCCGAA (4) 1.8 0.0018 E16.5 retina GTGTGGTCAC (3) 1.8 0.0018 E16.5 retina TCCTGGAGTC (4) 1.8 0.0018 E18.5 retina CGGCCACTGG (4) 5.5 0.0055 E18.5 retina GTGTGGTCAC (3) 5.5 0.0055 E18.5 retina TGGTGCTCAG (5) 3.6 0.0036 E18.5 retina GGCTCGCCTG (2) 1.8 0.0018 P0.5 retina CGGCCACTGG (4) 7.9 0.0079 P0.5 retina GGCTCGCCTG (2) 3.9 0.0039 P0.5 retina GTGTGGTCAC (3) 2 0.002 P0.5 retina TGGCCACTGG (9) 2 0.002 P2.5 retina CGGCCACTGG (4) 8.8 0.0088 P2.5 retina GGCTCGCCTG (2) 3.5 0.0035 P2.5 retina GTGTGGGTCA (5) 1.8 0.0018 P2.5 retina GTGTGGTCAC (3) 1.8 0.0018 P2.5 retina TGGCCACTGG (9) 1.8 0.0018 P4.5 retina CGGCCACTGG (4) 4 0.004 P4.5 retina GTGGGCCGAA (4) 2 0.002 P4.5 retina GTGTGGTCAC (3) 2 0.002 P4.5 retina TGGTGCTCAG (5) 2 0.002 P6.5 retina CGGCCACTGG (4) 3.3 0.0033 P6.5 retina GGCTCGCCTG (2) 3.3 0.0033 P6.5 retina GTGTGGGTCA (5) 3.3 0.0033 P6.5 retina GTGTGGTCAC (3) 3.3 0.0033 P6.5 retina AGCTCTGGGC (5) 1.7 0.0017 P6.5 retina GTAATAAATG (4) 1.7 0.0017 P6.5 retina TCCTGGAGTC (4) 1.7 0.0017 P6.5 retina TGGCCACTGG (9) 1.7 0.0017 P10.5 crx- retina CGGCCACTGG (4) 9.3 0.0093 P10.5 crx- retina GTGTGGTCAC (3) 5.6 0.0056 P10.5 crx- retina GGCTCGCCTG (2) 3.7 0.0037 P10.5 crx- retina TCCTGGAGTC (4) 1.9 0.0019 P10.5 crx- retina TGGCCACTGG (9) 1.9 0.0019 P10.5 crx- retina TTGCTGTGAC (6) 1.9 0.0019 P10.5 crx+ retina CGGCCACTGG (4) 15.4 0.0154 P10.5 crx+ retina GTGTGGTCAC (3) 9.6 0.0096 P10.5 crx+ retina CCCCCGCCCG (2) 1.9 0.0019 P10.5 crx+ retina GCAGCCATCA (5) 1.9 0.0019 P10.5 crx+ retina GTGTGGGTCA (5) 1.9 0.0019 P10.5 crx+ retina TCCTGGAGTC (4) 1.9 0.0019 P10.5 crx+ retina TTGCTGTGAC (6) 1.9 0.0019 Adult retinal CGGCCACTGG (4) 5.6 0.0056 Adult retinal GTGTGGTCAC (3) 5.6 0.0056 Adult retinal CCCCCGCCCG (2) 3.7 0.0037 Adult retinal GGCTCGCCTG (2) 3.7 0.0037 Adult retinal AGCTCTGGGC (5) 1.9 0.0019 Adult retinal CAGACAACCC (3) 1.9 0.0019 Adult retinal GTGTGGGTCA (5) 1.9 0.0019 Adult retinal TGGTGCTCAG (5) 1.9 0.0019 Adult retinal TTGCTGTGAC (6) 1.9 0.0019 ONL CGGCCACTGG (4) 1.9 0.0019 ONL GTGTGGGTCA (5) 1.9 0.0019 ONL GTGTGGTCAC (3) 1.9 0.0019