Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.223744	5530401D11Rik	RIKEN cDNA 5530401D11 gene	18		71360
Mm.223744	Kif5b	kinesin family member 5B	18	18 1.0 cM	16573
Gene Ontology	ATP binding | cytoplasm organization and biogenesis | kinesin complex | microtubule associated complex | microtubule motor activity | microtubule motor activity | microtubule-based process | mitochondrial transport | motor activity | protein binding
Human Homolog	KIF5B[kinesin family member 5B]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 111 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTGTAAATGT (3) 9.8 0.0098 P8 Cb GC GAGAAGACAC (6) 6.5 0.0065 P8 Cb GC GTGAAACGCT (2) 4.9 0.0049 P8 Cb GC TCGCAGTTAC (3) 3.3 0.0033 P8 Cb GC AAAAACCAAA (8) 1.6 0.0016 Cb medulloblastoma GAGAAGACAC (6) 27.7 0.0277 Cb medulloblastoma AAAAACCAAA (8) 6.9 0.0069 Cb medulloblastoma CTGTAAATGT (3) 6.9 0.0069 Cb medulloblastoma CCATAGGCCA (4) 2.3 0.0023 Cb medulloblastoma TAGAGGTCAG (4) 2.3 0.0023 Cb medulloblastoma TCGCAGTTAC (3) 2.3 0.0023 P8 GC+1d culture CTGTAAATGT (3) 11.4 0.0114 P8 GC+1d culture GAGAAGACAC (6) 10.3 0.0103 P8 GC+1d culture ACTTCATCTG (2) 1.1 0.0011 P8 GC+1d culture CCATAGGCCA (4) 1.1 0.0011 P8 GC+1d culture TGCAGTAAAT (8) 1.1 0.0011 P8 GC+1d culture TTGTTAATAA (4) 1.1 0.0011 P8 GC+SHH+1d culture TTAAATGGAT (2) 12.9 0.0129 P8 GC+SHH+1d culture CTGTAAATGT (3) 8.2 0.0082 P8 GC+SHH+1d culture GAGAAGACAC (6) 8.2 0.0082 P8 GC+SHH+1d culture TTGTTAATAA (4) 7 0.007 P8 GC+SHH+1d culture CCATAGGCCA (4) 1.2 0.0012 P8 GC+SHH+1d culture TGCAGTAAAT (8) 1.2 0.0012 3T3 fibroblasts AGCTCACGGT (2) 14 0.014 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts GAGAAGACAC (6) 7 0.007 3T3 fibroblasts GTGAAACGCT (2) 7 0.007 3T3 fibroblasts CCATAGGCCA (4) 3.5 0.0035 E15 cortex GTTAATTTTG (2) 9.9 0.0099 E15 cortex AAAAACCAAA (8) 4.9 0.0049 E15 cortex GAGAAGACAC (6) 4.9 0.0049 E15 cortex GTCATAGCTG (590) 4.9 0.0049 P1 cortex CTGTAAATGT (3) 9.1 0.0091 P1 cortex GTGAAACGCT (2) 9.1 0.0091 P1 cortex AAAAACCAAA (8) 4.5 0.0045 P1 cortex GCCAGAAGGG (2) 4.5 0.0045 P1 cortex GTTAATTTTG (2) 4.5 0.0045 P1 cortex TCGCAGTTAC (3) 4.5 0.0045 Hypothalamus CTGTAAATGT (3) 27.2 0.0272 Hypothalamus GAGAAGACAC (6) 19.9 0.0199 Hypothalamus TTGTTAATAA (4) 7.2 0.0072 Hypothalamus CCATAGGCCA (4) 1.8 0.0018 Hypothalamus GCCAGAAGGG (2) 1.8 0.0018 Hypothalamus GTGAAACGCT (2) 1.8 0.0018 Hypothalamus TAGAGGTCAG (4) 1.8 0.0018 Hypothalamus TGCAGTAAAT (8) 1.8 0.0018 E12.5 retina GAGAAGACAC (6) 11.3 0.0113 E12.5 retina CTGTAAATGT (3) 7.5 0.0075 E12.5 retina AAAAACCAAA (8) 3.8 0.0038 E12.5 retina GTGAAACGCT (2) 1.9 0.0019 E12.5 retina TTGTTAATAA (4) 1.9 0.0019 E14.5 retina GAGAAGACAC (6) 12.8 0.0128 E14.5 retina TTGTTAATAA (4) 9.1 0.0091 E14.5 retina CTGTAAATGT (3) 5.5 0.0055 E16.5 retina GAGAAGACAC (6) 10.9 0.0109 E16.5 retina CTGTAAATGT (3) 5.4 0.0054 E16.5 retina TTGTTAATAA (4) 5.4 0.0054 E16.5 retina AAAAACCAAA (8) 1.8 0.0018 E16.5 retina GCCAGAAGGG (2) 1.8 0.0018 E16.5 retina TCGCAGTTAC (3) 1.8 0.0018 E16.5 retina TGCAGTAAAT (8) 1.8 0.0018 E18.5 retina GAGAAGACAC (6) 9.1 0.0091 E18.5 retina AAAAACCAAA (8) 1.8 0.0018 E18.5 retina CTGTAAATGT (3) 1.8 0.0018 P0.5 retina GAGAAGACAC (6) 7.9 0.0079 P0.5 retina CTGTAAATGT (3) 5.9 0.0059 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P2.5 retina GAGAAGACAC (6) 17.6 0.0176 P2.5 retina CTGTAAATGT (3) 14.1 0.0141 P2.5 retina ACTTCATCTG (2) 3.5 0.0035 P2.5 retina TGCAGTAAAT (8) 3.5 0.0035 P2.5 retina TTGTTAATAA (4) 3.5 0.0035 P2.5 retina GCCAGAAGGG (2) 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P4.5 retina GAGAAGACAC (6) 19.8 0.0198 P4.5 retina CTGTAAATGT (3) 11.9 0.0119 P4.5 retina TTGTTAATAA (4) 9.9 0.0099 P4.5 retina AAAAACCAAA (8) 4 0.004 P4.5 retina AAATGGAAAA (8) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P4.5 retina GTTAATTTTG (2) 2 0.002 P6.5 retina GAGAAGACAC (6) 21.7 0.0217 P6.5 retina CTGTAAATGT (3) 11.7 0.0117 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina TTGTTAATAA (4) 3.3 0.0033 P6.5 retina GTGAAACGCT (2) 1.7 0.0017 P10.5 crx- retina GAGAAGACAC (6) 7.4 0.0074 P10.5 crx- retina CCATAGGCCA (4) 3.7 0.0037 P10.5 crx- retina CTGTAAATGT (3) 3.7 0.0037 P10.5 crx- retina AAAAACCAAA (8) 1.9 0.0019 P10.5 crx- retina TTGTTAAGAA (3) 1.9 0.0019 P10.5 crx- retina TTGTTAATAA (4) 1.9 0.0019 P10.5 crx+ retina CTGTAAATGT (3) 23.1 0.0231 P10.5 crx+ retina GAGAAGACAC (6) 5.8 0.0058 P10.5 crx+ retina AAAAACCAAA (8) 1.9 0.0019 P10.5 crx+ retina GTGAAACGCT (2) 1.9 0.0019 P10.5 crx+ retina TTGTTAAGAA (3) 1.9 0.0019 P10.5 crx+ retina TTGTTAATAA (4) 1.9 0.0019 Adult retinal GAGAAGACAC (6) 18.5 0.0185 Adult retinal CTGTAAATGT (3) 5.6 0.0056 Adult retinal GTGAAACGCT (2) 3.7 0.0037 Adult retinal TCGCAGTTAC (3) 3.7 0.0037 Adult retinal CCATAGGCCA (4) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 Adult retinal TAGAGGTCAG (4) 1.9 0.0019 ONL GAGAAGACAC (6) 7.7 0.0077 ONL GTCATAGCTG (590) 5.7 0.0057 ONL AAATGGAAAA (8) 3.8 0.0038 ONL CTGTAAATGT (3) 3.8 0.0038 ONL TTGTTAAGAA (3) 1.9 0.0019 ONL TTGTTAATAA (4) 1.9 0.0019