Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.2238	A830012B05Rik	RIKEN cDNA A830012B05 gene	19		320318
Mm.2238	Eif3s10	eukaryotic translation initiation factor 3, subunit 10 (theta)	19		13669
Gene Ontology	nucleus | protein biosynthesis | translation initiation factor activity
Human Homolog	EIF3S10[eukaryotic translation initiation factor 3, subunit 10 theta, 150/170kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 113 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGTGTGTGTG (115) 27.7 0.0277 P8 Cb GC CATTTTCTGG (5) 19.6 0.0196 P8 Cb GC CCATTTTCTG (5) 11.4 0.0114 P8 Cb GC CCTTTCAAGC (2) 6.5 0.0065 P8 Cb GC GACCTGCTGG (7) 1.6 0.0016 P8 Cb GC GACTTCAATG (5) 1.6 0.0016 P8 Cb GC GTTTATTTTT (5) 1.6 0.0016 P8 Cb GC GTTTGTTACC (3) 1.6 0.0016 P8 Cb GC TTTCGTGTTG (3) 1.6 0.0016 Cb medulloblastoma TGTGTGTGTG (115) 30.1 0.0301 Cb medulloblastoma CATTTTCTGG (5) 11.6 0.0116 Cb medulloblastoma CCATTTTCTG (5) 2.3 0.0023 Cb medulloblastoma GCAGCCAGCA (5) 2.3 0.0023 Cb medulloblastoma GTTTATTTTT (5) 2.3 0.0023 Cb medulloblastoma TTTCGTGTTG (3) 2.3 0.0023 P8 GC+1d culture TGTGTGTGTG (115) 27.4 0.0274 P8 GC+1d culture CATTTTCTGG (5) 13.7 0.0137 P8 GC+1d culture CCTTTCAAGC (2) 5.7 0.0057 P8 GC+1d culture TTTCGTGTTG (3) 5.7 0.0057 P8 GC+1d culture GTTTATTTTT (5) 3.4 0.0034 P8 GC+1d culture CCATTTTCTG (5) 2.3 0.0023 P8 GC+SHH+1d culture TGTGTGTGTG (115) 28.1 0.0281 P8 GC+SHH+1d culture CATTTTCTGG (5) 7 0.007 P8 GC+SHH+1d culture CCATTTTCTG (5) 3.5 0.0035 P8 GC+SHH+1d culture TTTCGTGTTG (3) 3.5 0.0035 P8 GC+SHH+1d culture CCTTTCAAGC (2) 2.3 0.0023 P8 GC+SHH+1d culture GTTTATTTTT (5) 2.3 0.0023 P8 GC+SHH+1d culture GTTTGTTACC (3) 2.3 0.0023 P8 GC+SHH+1d culture GACTTCAATG (5) 1.2 0.0012 3T3 fibroblasts TGTGTGTGTG (115) 28 0.028 3T3 fibroblasts GACCTGTGGG (2) 14 0.014 3T3 fibroblasts TTTCGTGTTG (3) 7 0.007 3T3 fibroblasts AATTAGTGGA (2) 3.5 0.0035 3T3 fibroblasts AGAGGAAAAG (3) 3.5 0.0035 3T3 fibroblasts CCTTTCAAGC (2) 3.5 0.0035 E15 cortex TTTCGTGTTG (3) 9.9 0.0099 E15 cortex CCATTTTCTG (5) 4.9 0.0049 P1 cortex TGTGTGTGTG (115) 18.2 0.0182 P1 cortex AGAGGAAAAG (3) 4.5 0.0045 Hypothalamus TGTGTGTGTG (115) 25.4 0.0254 Hypothalamus CATTTTCTGG (5) 3.6 0.0036 Hypothalamus GTTTGTTACC (3) 1.8 0.0018 E12.5 retina TGTGTGTGTG (115) 43.2 0.0432 E12.5 retina CCATTTTCTG (5) 11.3 0.0113 E12.5 retina CATTTTCTGG (5) 9.4 0.0094 E12.5 retina CCTTTCAAGC (2) 7.5 0.0075 E12.5 retina TTTCGTGTTG (3) 7.5 0.0075 E12.5 retina GTTTGTTACC (3) 3.8 0.0038 E12.5 retina GTTTATTTTT (5) 1.9 0.0019 E14.5 retina TGTGTGTGTG (115) 54.7 0.0547 E14.5 retina TTTCGTGTTG (3) 5.5 0.0055 E14.5 retina CAGTGTTTGG (6) 3.6 0.0036 E14.5 retina CCTTTCAAGC (2) 3.6 0.0036 E14.5 retina GTTTATTTTT (5) 3.6 0.0036 E14.5 retina AATTAGTGGA (2) 1.8 0.0018 E14.5 retina AGAGGAAAAG (3) 1.8 0.0018 E14.5 retina CATTTTCTGG (5) 1.8 0.0018 E14.5 retina GGATGGAATG (7) 1.8 0.0018 E14.5 retina GTTTGTTACC (3) 1.8 0.0018 E16.5 retina TGTGTGTGTG (115) 39.8 0.0398 E16.5 retina CCATTTTCTG (5) 10.9 0.0109 E16.5 retina TTTCGTGTTG (3) 7.2 0.0072 E16.5 retina CCTTTCAAGC (2) 3.6 0.0036 E16.5 retina GTTTATTTTT (5) 3.6 0.0036 E16.5 retina GTTTGTTACC (3) 3.6 0.0036 E16.5 retina CATTTTCTGG (5) 1.8 0.0018 E18.5 retina TGTGTGTGTG (115) 47.3 0.0473 E18.5 retina AATTAGTGGA (2) 1.8 0.0018 E18.5 retina CCATTTTCTG (5) 1.8 0.0018 E18.5 retina TTTCGTGTTG (3) 1.8 0.0018 P0.5 retina TGTGTGTGTG (115) 21.6 0.0216 P0.5 retina CATTTTCTGG (5) 3.9 0.0039 P0.5 retina CCATTTTCTG (5) 3.9 0.0039 P0.5 retina CCTTTCAAGC (2) 3.9 0.0039 P0.5 retina GTTTATTTTT (5) 3.9 0.0039 P0.5 retina TTTCGTGTTG (3) 3.9 0.0039 P0.5 retina GGATGGAATG (7) 2 0.002 P0.5 retina GTTTGTTACC (3) 2 0.002 P2.5 retina TGTGTGTGTG (115) 35.2 0.0352 P2.5 retina CATTTTCTGG (5) 12.3 0.0123 P2.5 retina TTTCGTGTTG (3) 10.6 0.0106 P2.5 retina CCTTTCAAGC (2) 3.5 0.0035 P2.5 retina GTTTATTTTT (5) 1.8 0.0018 P4.5 retina TGTGTGTGTG (115) 47.6 0.0476 P4.5 retina TTTCGTGTTG (3) 13.9 0.0139 P4.5 retina CCATTTTCTG (5) 9.9 0.0099 P4.5 retina CATTTTCTGG (5) 5.9 0.0059 P4.5 retina AATTAGTGGA (2) 2 0.002 P4.5 retina GACTTCAATG (5) 2 0.002 P4.5 retina GGATGGAATG (7) 2 0.002 P6.5 retina TGTGTGTGTG (115) 41.7 0.0417 P6.5 retina CCATTTTCTG (5) 8.3 0.0083 P6.5 retina CATTTTCTGG (5) 6.7 0.0067 P6.5 retina TTTCGTGTTG (3) 3.3 0.0033 P6.5 retina CCATCTTCTG (6) 1.7 0.0017 P6.5 retina GTTTATTTTT (5) 1.7 0.0017 P10.5 crx- retina TGTGTGTGTG (115) 59.4 0.0594 P10.5 crx- retina CCTTTCAAGC (2) 7.4 0.0074 P10.5 crx- retina CATTTTCTGG (5) 3.7 0.0037 P10.5 crx- retina TTTCGTGTTG (3) 1.9 0.0019 P10.5 crx+ retina TGTGTGTGTG (115) 44.2 0.0442 P10.5 crx+ retina CATTTTCTGG (5) 5.8 0.0058 P10.5 crx+ retina CCTTTCAAGC (2) 3.8 0.0038 P10.5 crx+ retina CAGTGTTTGG (6) 1.9 0.0019 P10.5 crx+ retina GACCTGCTGG (7) 1.9 0.0019 P10.5 crx+ retina GCAGCCAGCA (5) 1.9 0.0019 P10.5 crx+ retina TTTCGTGTTG (3) 1.9 0.0019 Adult retinal TGTGTGTGTG (115) 53.7 0.0537 Adult retinal TTTCGTGTTG (3) 3.7 0.0037 Adult retinal CCATCTTCTG (6) 1.9 0.0019 Adult retinal GGATGGAATG (7) 1.9 0.0019 ONL TGTGTGTGTG (115) 23 0.023 ONL CCATCTTCTG (6) 1.9 0.0019