Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.22453	1190002A23Rik	RIKEN cDNA 1190002A23 gene	4		68873
Mm.22453	Tardbp	TAR DNA binding protein	4		230908
Mm.22453	Masp2	mannan-binding lectin serine protease 2	4		17175
Gene Ontology	extracellular space | hydrolase activity | peptidase activity | serine-type endopeptidase activity | sugar binding
Human Homolog	MASP2[mannan-binding lectin serine protease 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 62 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTGCTTGCA (3) 4.9 0.0049 P8 Cb GC CTTTTAATCC (33) 3.3 0.0033 P8 Cb GC TTTATGGATG (4) 1.6 0.0016 Cb medulloblastoma TTTGCTTGCA (3) 9.2 0.0092 Cb medulloblastoma GTCTGGCTGG (12) 2.3 0.0023 Cb medulloblastoma TTTATGGATG (4) 2.3 0.0023 P8 GC+1d culture TTTGCTTGCA (3) 3.4 0.0034 P8 GC+1d culture TTTATGGATG (4) 2.3 0.0023 P8 GC+1d culture CTTTTAATCC (33) 1.1 0.0011 P8 GC+SHH+1d culture TTTGCTTGCA (3) 4.7 0.0047 P8 GC+SHH+1d culture TTTATGGATG (4) 2.3 0.0023 P8 GC+SHH+1d culture CTTTTAATCC (33) 1.2 0.0012 3T3 fibroblasts CCTGTTTGCC (4) 14 0.014 3T3 fibroblasts CTCTGTGCTG (14) 3.5 0.0035 E15 cortex GTCTGGCTGG (12) 4.9 0.0049 E15 cortex TTTGCTTGCA (3) 4.9 0.0049 P1 cortex CTTTTAATCC (33) 4.5 0.0045 Hypothalamus AAGGCTACAC (4) 3.6 0.0036 Hypothalamus GTCTGGCTGG (12) 3.6 0.0036 Hypothalamus CTCTGTGCTG (14) 1.8 0.0018 Hypothalamus TTTATGGATG (4) 1.8 0.0018 Hypothalamus TTTGCTTGCA (3) 1.8 0.0018 E12.5 retina TTTGCTTGCA (3) 3.8 0.0038 E12.5 retina CTTTTAATCC (33) 1.9 0.0019 E14.5 retina TTTATGGATG (4) 3.6 0.0036 E14.5 retina TTTGCTTGCA (3) 3.6 0.0036 E14.5 retina CTTTTAATCC (33) 1.8 0.0018 E14.5 retina TAAAATGGTT (4) 1.8 0.0018 E16.5 retina CTTTTAATCC (33) 7.2 0.0072 E16.5 retina CCTGTTTGCC (4) 5.4 0.0054 E16.5 retina TTTGCTTGCA (3) 1.8 0.0018 E18.5 retina TTTGCTTGCA (3) 5.5 0.0055 P0.5 retina TTTGCTTGCA (3) 3.9 0.0039 P0.5 retina CTCTGTGCTG (14) 2 0.002 P0.5 retina TTTATGGATG (4) 2 0.002 P2.5 retina TTTATGGATG (4) 3.5 0.0035 P2.5 retina TTTGCTTGCA (3) 3.5 0.0035 P2.5 retina AAGGCTACAC (4) 1.8 0.0018 P2.5 retina CTCTGTGCTG (14) 1.8 0.0018 P2.5 retina TAAAATGGTT (4) 1.8 0.0018 P4.5 retina TAAAATGGTT (4) 5.9 0.0059 P4.5 retina AAGGCTACAC (4) 2 0.002 P4.5 retina CTCTGTGCTG (14) 2 0.002 P4.5 retina TTTGCTTGCA (3) 2 0.002 P6.5 retina TTTGCTTGCA (3) 6.7 0.0067 P6.5 retina CTCTGTGCTG (14) 3.3 0.0033 P10.5 crx- retina TTTGCTTGCA (3) 7.4 0.0074 P10.5 crx- retina CTTTTAATCC (33) 3.7 0.0037 P10.5 crx- retina CTCTGTGCTG (14) 1.9 0.0019 P10.5 crx- retina TAAAATGGTT (4) 1.9 0.0019 P10.5 crx- retina TTTATGGATG (4) 1.9 0.0019 P10.5 crx+ retina TTTATGGATG (4) 5.8 0.0058 P10.5 crx+ retina TTTGCTTGCA (3) 3.8 0.0038 P10.5 crx+ retina AAGGCTACAC (4) 1.9 0.0019 P10.5 crx+ retina CCTGTTTGCC (4) 1.9 0.0019 Adult retinal CTTTTAATCC (33) 3.7 0.0037 Adult retinal GTCTGGCTGG (12) 1.9 0.0019 Adult retinal TTTATGGATG (4) 1.9 0.0019 Adult retinal TTTGCTTGCA (3) 1.9 0.0019 ONL CTTTTAATCC (33) 5.7 0.0057 ONL AAGGCTACAC (4) 1.9 0.0019 ONL TTTGCTTGCA (3) 1.9 0.0019