Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.2246
Psmb7
proteasome (prosome, macropain) subunit, beta type 7
2
2 27.5 cM
19177
Mm.2246
DXMgi25
DNA Segment, Chr X, Mouse Genome Informatics 25
X
102986
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 47 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCTTTGGCAA
(
4
)
35.9
0.0359
P8 Cb GC
TTTTCTGGTT
(
4
)
1.6
0.0016
Cb medulloblastoma
CCTTTGGCAA
(
4
)
20.8
0.0208
P8 GC+1d culture
CCTTTGGCAA
(
4
)
18.3
0.0183
P8 GC+1d culture
GGTTCTGGCT
(
4
)
1.1
0.0011
P8 GC+SHH+1d culture
CCTTTGGCAA
(
4
)
30.4
0.0304
P8 GC+SHH+1d culture
GCTGCTGTTT (
3
)
1.2
0.0012
P8 GC+SHH+1d culture
TCTGTGTCTG (
4
)
1.2
0.0012
P8 GC+SHH+1d culture
TTCAAGACCA (
5
)
1.2
0.0012
P8 GC+SHH+1d culture
TTTTCTGGTT
(
4
)
1.2
0.0012
3T3 fibroblasts
CCTTTGGCAA
(
4
)
14
0.014
E15 cortex
CCTTTGGCAA
(
4
)
59.4
0.0594
E15 cortex
TTCAAGACCA (
5
)
4.9
0.0049
P1 cortex
CCTTTGGCAA
(
4
)
13.6
0.0136
P1 cortex
GGTTCTGGCT
(
4
)
4.5
0.0045
P1 cortex
TCTGTGTCTG (
4
)
4.5
0.0045
Hypothalamus
CCTTTGGCAA
(
4
)
19.9
0.0199
Hypothalamus
TCTGTGTCTG (
4
)
3.6
0.0036
Hypothalamus
TTTTCTGGTT
(
4
)
3.6
0.0036
Hypothalamus
GCTGCTGTTT (
3
)
1.8
0.0018
E12.5 retina
CCTTTGGCAA
(
4
)
39.4
0.0394
E12.5 retina
GGTTCTGGCT
(
4
)
1.9
0.0019
E14.5 retina
CCTTTGGCAA
(
4
)
21.9
0.0219
E14.5 retina
TTTTCTGGTT
(
4
)
1.8
0.0018
E16.5 retina
CCTTTGGCAA
(
4
)
19.9
0.0199
E16.5 retina
TTTTCTGGTT
(
4
)
3.6
0.0036
E16.5 retina
GGATCTGGCT (
7
)
1.8
0.0018
E18.5 retina
CCTTTGGCAA
(
4
)
30.9
0.0309
E18.5 retina
GGATCTGGCT (
7
)
3.6
0.0036
E18.5 retina
GGTTCTGGCT
(
4
)
3.6
0.0036
P0.5 retina
CCTTTGGCAA
(
4
)
15.7
0.0157
P0.5 retina
GGATCTGGCT (
7
)
3.9
0.0039
P0.5 retina
TCTGTGTCTG (
4
)
2
0.002
P2.5 retina
CCTTTGGCAA
(
4
)
35.2
0.0352
P4.5 retina
CCTTTGGCAA
(
4
)
17.8
0.0178
P6.5 retina
CCTTTGGCAA
(
4
)
23.3
0.0233
P6.5 retina
TTTTCTGGTT
(
4
)
3.3
0.0033
P10.5 crx- retina
CCTTTGGCAA
(
4
)
37.2
0.0372
P10.5 crx- retina
GGTTCTGGCT
(
4
)
1.9
0.0019
P10.5 crx+ retina
CCTTTGGCAA
(
4
)
32.7
0.0327
P10.5 crx+ retina
GGTTCTGGCT
(
4
)
1.9
0.0019
P10.5 crx+ retina
TTTTCTGGTT
(
4
)
1.9
0.0019
Adult retinal
CCTTTGGCAA
(
4
)
25.9
0.0259
Adult retinal
GCTGCTGTTT (
3
)
1.9
0.0019
Adult retinal
GGTTCTGGCT
(
4
)
1.9
0.0019
Adult retinal
TTCAAGACCA (
5
)
1.9
0.0019
ONL
CCTTTGGCAA
(
4
)
7.7
0.0077
