Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.224885
MGC29978
3-ketoacyl-CoA thiolase B
9
235674
Human Homolog
ACAA1[acetyl-Coenzyme A acyltransferase 1 (peroxisomal 3-oxoacyl-Coenzyme A thiolase)]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 43 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TTTTGCCTTA (
5
)
9.8
0.0098
P8 Cb GC
TGCTCGAGAA (
7
)
1.6
0.0016
Cb medulloblastoma
TACATATGGA
(
4
)
9.2
0.0092
Cb medulloblastoma
GTGCTGGAAT (
2
)
4.6
0.0046
P8 GC+1d culture
TACATATGGA
(
4
)
4.6
0.0046
P8 GC+1d culture
GTGCTGGAAT (
2
)
2.3
0.0023
P8 GC+SHH+1d culture
TACATATGGA
(
4
)
4.7
0.0047
P8 GC+SHH+1d culture
TTTTGCCTTA (
5
)
2.3
0.0023
P8 GC+SHH+1d culture
TGCTCGAGAA (
7
)
1.2
0.0012
E15 cortex
CAGGGCCTGG (
5
)
4.9
0.0049
E15 cortex
GCTGTGGGGT (
5
)
4.9
0.0049
P1 cortex
CAGGGCCTGG (
5
)
4.5
0.0045
Hypothalamus
TACATATGGA
(
4
)
7.2
0.0072
Hypothalamus
TGCTCGAGAA (
7
)
1.8
0.0018
E12.5 retina
TACATATGGA
(
4
)
7.5
0.0075
E12.5 retina
TTTTGCCTTA (
5
)
3.8
0.0038
E14.5 retina
TACATATGGA
(
4
)
1.8
0.0018
E14.5 retina
TGCTCGAGAA (
7
)
1.8
0.0018
E14.5 retina
TTTTGCCTTA (
5
)
1.8
0.0018
E16.5 retina
TACATATGGA
(
4
)
5.4
0.0054
E16.5 retina
TTTTGCCTTA (
5
)
3.6
0.0036
E16.5 retina
TGCTCGAGAA (
7
)
1.8
0.0018
E18.5 retina
CAGGGCCTGG (
5
)
1.8
0.0018
E18.5 retina
TACATATGGA
(
4
)
1.8
0.0018
E18.5 retina
TTTTGCCTTA (
5
)
1.8
0.0018
P0.5 retina
TTTTGCCTTA (
5
)
3.9
0.0039
P0.5 retina
TACATATGGA
(
4
)
2
0.002
P2.5 retina
TACATATGGA
(
4
)
7
0.007
P4.5 retina
TACATATGGA
(
4
)
9.9
0.0099
P6.5 retina
TACATATGGA
(
4
)
6.7
0.0067
P6.5 retina
GTGCTGGAAT (
2
)
1.7
0.0017
P10.5 crx- retina
TACATATGGA
(
4
)
9.3
0.0093
P10.5 crx- retina
GTGCTGGAAT (
2
)
3.7
0.0037
P10.5 crx+ retina
TACATATGGA
(
4
)
5.8
0.0058
P10.5 crx+ retina
AGGCTTGCAG (
2
)
3.8
0.0038
P10.5 crx+ retina
GTGCTGGAAT (
2
)
3.8
0.0038
Adult retinal
AGGCTTGCAG (
2
)
50
0.05
Adult retinal
GTGCTGGAAT (
2
)
1.9
0.0019
Adult retinal
TACATATGGA
(
4
)
1.9
0.0019
ONL
AGGCTTGCAG (
2
)
17.2
0.0172
ONL
TGCTCGAGAA (
7
)
3.8
0.0038
ONL
GCTGTGGGGT (
5
)
1.9
0.0019
ONL
TACATATGGA
(
4
)
1.9
0.0019
