Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.22521
Pygo2
pygopus 2
3
68911
Human Homolog
PYGO2[pygopus 2]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 65 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GCTGCTGTGT (
6
)
4.9
0.0049
P8 Cb GC
GGCCAGTTGG
(
6
)
4.9
0.0049
P8 Cb GC
TTTGCCAAAA (
5
)
3.3
0.0033
P8 Cb GC
GGAGGTCCTG (
7
)
1.6
0.0016
Cb medulloblastoma
GGCCAGTTGG
(
6
)
18.5
0.0185
Cb medulloblastoma
GCTGCTGTGT (
6
)
9.2
0.0092
Cb medulloblastoma
GGAGGTCCTG (
7
)
4.6
0.0046
Cb medulloblastoma
TTTGCCAAAA (
5
)
2.3
0.0023
P8 GC+1d culture
GCTGCTGTGT (
6
)
8
0.008
P8 GC+1d culture
GGAGGTCCTG (
7
)
3.4
0.0034
P8 GC+1d culture
GGCCAGTTGG
(
6
)
3.4
0.0034
P8 GC+1d culture
GCTGCTGCTG (
21
)
2.3
0.0023
P8 GC+SHH+1d culture
GGCCAGTTGG
(
6
)
5.9
0.0059
P8 GC+SHH+1d culture
GCTGCTGTGT (
6
)
3.5
0.0035
P8 GC+SHH+1d culture
GGAGGTCCTG (
7
)
2.3
0.0023
P8 GC+SHH+1d culture
GTTTGTAAAA
(
3
)
1.2
0.0012
3T3 fibroblasts
GGCCAGTTGG
(
6
)
21
0.021
E15 cortex
GGCCAGTTGG
(
6
)
14.8
0.0148
E15 cortex
GCTGCTGTGT (
6
)
4.9
0.0049
P1 cortex
GGCCAGTTGG
(
6
)
4.5
0.0045
P1 cortex
GTTTGTAAAA
(
3
)
4.5
0.0045
Hypothalamus
GGAGGTCCTG (
7
)
9.1
0.0091
Hypothalamus
GGCCAGTTGG
(
6
)
5.4
0.0054
Hypothalamus
GCTGCTGTGT (
6
)
1.8
0.0018
Hypothalamus
GGCATTCCAA (
2
)
1.8
0.0018
E12.5 retina
GCTGCTGTGT (
6
)
11.3
0.0113
E12.5 retina
GGCATTCCAA (
2
)
3.8
0.0038
E12.5 retina
GGAGGTCCTG (
7
)
1.9
0.0019
E12.5 retina
GGCCAGTTGG
(
6
)
1.9
0.0019
E12.5 retina
GTTTGTAAAA
(
3
)
1.9
0.0019
E12.5 retina
TTTGCCAAAA (
5
)
1.9
0.0019
E14.5 retina
GCTGCTGTGT (
6
)
3.6
0.0036
E14.5 retina
GTTTGTAAAA
(
3
)
1.8
0.0018
E14.5 retina
TTTGCCAAAA (
5
)
1.8
0.0018
E16.5 retina
GCTGCTGTGT (
6
)
7.2
0.0072
E16.5 retina
GTTTGTAAAA
(
3
)
5.4
0.0054
E16.5 retina
GGCCAGTTGG
(
6
)
3.6
0.0036
E18.5 retina
GCTGCTGTGT (
6
)
7.3
0.0073
E18.5 retina
GGCCAGTTGG
(
6
)
3.6
0.0036
P0.5 retina
GGCCAGTTGG
(
6
)
9.8
0.0098
P0.5 retina
GCTGCTGTGT (
6
)
3.9
0.0039
P0.5 retina
GCTGCTGCTG (
21
)
2
0.002
P2.5 retina
GCTGCTGTGT (
6
)
10.6
0.0106
P2.5 retina
GGCATTCCAA (
2
)
3.5
0.0035
P2.5 retina
GGAGGTCCTG (
7
)
1.8
0.0018
P2.5 retina
GTTTGTAAAA
(
3
)
1.8
0.0018
P4.5 retina
GCTGCTGTGT (
6
)
7.9
0.0079
P4.5 retina
GGCCAGTTGG
(
6
)
4
0.004
P4.5 retina
GGAGGTCCTG (
7
)
2
0.002
P4.5 retina
TTTGCCAAAA (
5
)
2
0.002
P6.5 retina
GGAGGTCCTG (
7
)
10
0.01
P6.5 retina
GGCCAGTTGG
(
6
)
5
0.005
P6.5 retina
GCTGCTGCTG (
21
)
1.7
0.0017
P6.5 retina
GCTGCTGTGT (
6
)
1.7
0.0017
P6.5 retina
GGCATTCCAA (
2
)
1.7
0.0017
P10.5 crx- retina
GGCCAGTTGG
(
6
)
14.9
0.0149
P10.5 crx- retina
GCTGCTGTGT (
6
)
5.6
0.0056
P10.5 crx- retina
GTTTGTAAAA
(
3
)
1.9
0.0019
P10.5 crx+ retina
GGCCAGTTGG
(
6
)
17.3
0.0173
P10.5 crx+ retina
GGAGGTCCTG (
7
)
13.5
0.0135
P10.5 crx+ retina
GCTGCTGTGT (
6
)
9.6
0.0096
P10.5 crx+ retina
GTTTGTAAAA
(
3
)
1.9
0.0019
Adult retinal
GCTGCTGTGT (
6
)
7.4
0.0074
Adult retinal
GGCCAGTTGG
(
6
)
5.6
0.0056
Adult retinal
GGAGGTCCTG (
7
)
3.7
0.0037
