Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.225289
1300010A20Rik
RIKEN cDNA 1300010A20 gene
6
232670
Gene Ontology
integral to membrane
Human Homolog
MGC50844[hypothetical protein MGC50844]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 62 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GAAAAAAAAA (
204
)
45.7
0.0457
P8 Cb GC
GGAAAAAAAA
(
69
)
8.2
0.0082
P8 Cb GC
TATGGCTTAG (
5
)
4.9
0.0049
P8 Cb GC
CTGCAGCTGG (
7
)
1.6
0.0016
P8 Cb GC
GGCAAAAAAA (
17
)
1.6
0.0016
Cb medulloblastoma
GAAAAAAAAA (
204
)
173.4
0.1734
Cb medulloblastoma
GGAAAAAAAA
(
69
)
41.6
0.0416
Cb medulloblastoma
GGCAAAAAAA (
17
)
11.6
0.0116
Cb medulloblastoma
CTGCAGCTGG (
7
)
4.6
0.0046
P8 GC+1d culture
GAAAAAAAAA (
204
)
41.1
0.0411
P8 GC+1d culture
GGAAAAAAAA
(
69
)
5.7
0.0057
P8 GC+1d culture
TATGGCTTAG (
5
)
2.3
0.0023
P8 GC+1d culture
GCAATCACAA (
2
)
1.1
0.0011
P8 GC+SHH+1d culture
GAAAAAAAAA (
204
)
77.3
0.0773
P8 GC+SHH+1d culture
GGAAAAAAAA
(
69
)
7
0.007
P8 GC+SHH+1d culture
TATGGCTTAG (
5
)
2.3
0.0023
P8 GC+SHH+1d culture
GGCAAAAAAA (
17
)
1.2
0.0012
E15 cortex
GAAAAAAAAA (
204
)
54.4
0.0544
E15 cortex
GGAAAAAAAA
(
69
)
9.9
0.0099
P1 cortex
GAAAAAAAAA (
204
)
45.5
0.0455
P1 cortex
GGAAAAAAAA
(
69
)
4.5
0.0045
Hypothalamus
GAAAAAAAAA (
204
)
67
0.067
Hypothalamus
GGAAAAAAAA
(
69
)
14.5
0.0145
Hypothalamus
GGCAAAAAAA (
17
)
3.6
0.0036
E12.5 retina
GAAAAAAAAA (
204
)
46.9
0.0469
E12.5 retina
TATGGCTTAG (
5
)
3.8
0.0038
E12.5 retina
GGAAAAAAAA
(
69
)
1.9
0.0019
E14.5 retina
GAAAAAAAAA (
204
)
34.6
0.0346
E14.5 retina
GGAAAAAAAA
(
69
)
10.9
0.0109
E14.5 retina
GGCAAAAAAA (
17
)
3.6
0.0036
E16.5 retina
GAAAAAAAAA (
204
)
23.5
0.0235
E16.5 retina
GCAATCACAA (
2
)
1.8
0.0018
E16.5 retina
GGAAAAAAAA
(
69
)
1.8
0.0018
E18.5 retina
GAAAAAAAAA (
204
)
65.5
0.0655
E18.5 retina
GGAAAAAAAA
(
69
)
16.4
0.0164
E18.5 retina
TATGGCTTAG (
5
)
1.8
0.0018
P0.5 retina
GAAAAAAAAA (
204
)
35.3
0.0353
P0.5 retina
GGAAAAAAAA
(
69
)
13.7
0.0137
P0.5 retina
CTGCAGCTGG (
7
)
2
0.002
P2.5 retina
GAAAAAAAAA (
204
)
86.2
0.0862
P2.5 retina
GGAAAAAAAA
(
69
)
7
0.007
P2.5 retina
GCAATCACAA (
2
)
1.8
0.0018
P4.5 retina
GAAAAAAAAA (
204
)
51.5
0.0515
P4.5 retina
GGAAAAAAAA
(
69
)
13.9
0.0139
P4.5 retina
TATGGCTTAG (
5
)
4
0.004
P4.5 retina
GGCAAAAAAA (
17
)
2
0.002
P6.5 retina
GAAAAAAAAA (
204
)
40
0.04
P6.5 retina
GGAAAAAAAA
(
69
)
13.3
0.0133
P6.5 retina
GGCAAAAAAA (
17
)
1.7
0.0017
P10.5 crx- retina
GAAAAAAAAA (
204
)
16.7
0.0167
P10.5 crx- retina
GGAAAAAAAA
(
69
)
3.7
0.0037
P10.5 crx- retina
CTGCAGCTGG (
7
)
1.9
0.0019
P10.5 crx- retina
GGCAAAAAAA (
17
)
1.9
0.0019
P10.5 crx+ retina
GAAAAAAAAA (
204
)
42.3
0.0423
P10.5 crx+ retina
GGAAAAAAAA
(
69
)
15.4
0.0154
P10.5 crx+ retina
GGCAAAAAAA (
17
)
3.8
0.0038
P10.5 crx+ retina
CTGCAGCTGG (
7
)
1.9
0.0019
Adult retinal
GAAAAAAAAA (
204
)
16.7
0.0167
Adult retinal
GGAAAAAAAA
(
69
)
5.6
0.0056
Adult retinal
CTGCAGCTGG (
7
)
3.7
0.0037
ONL
GAAAAAAAAA (
204
)
24.9
0.0249
ONL
GGAAAAAAAA
(
69
)
17.2
0.0172
