Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.22574	Csf1r	colony stimulating factor 1 receptor	18	18 30.0 cM	12978
Gene Ontology	ATP binding | cell growth and/or maintenance | extracellular space | integral to membrane | intracellular | kinase activity | membrane | protein amino acid phosphorylation | protein binding | protein kinase activity | protein serine/threonine kinase activity | protein-tyrosine kinase activity | receptor activity | regulation of cell cycle | transferase activity | transmembrane receptor protein tyrosine kinase activity | transmembrane receptor protein tyrosine kinase signaling pathway
Human Homolog	CSF1R[colony stimulating factor 1 receptor, formerly McDonough feline sarcoma viral (v-fms) oncogene homolog]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 86 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGAAACACTG (4) 21.2 0.0212 P8 Cb GC GGCTCAGGTG (4) 4.9 0.0049 P8 Cb GC TGGCCAAGAT (4) 3.3 0.0033 Cb medulloblastoma TTTCAAATAA 6.9 0.0069 Cb medulloblastoma ATGCTGTATA (3) 2.3 0.0023 Cb medulloblastoma CTGGTGTTTG (6) 2.3 0.0023 Cb medulloblastoma GGCTCAGGTG (4) 2.3 0.0023 Cb medulloblastoma TGAAACACTG (4) 2.3 0.0023 P8 GC+1d culture TTTCAAATAA 12.6 0.0126 P8 GC+1d culture TGAAACACTG (4) 9.1 0.0091 P8 GC+1d culture GGCTCAGGTG (4) 2.3 0.0023 P8 GC+1d culture ATGCTGTATA (3) 1.1 0.0011 P8 GC+1d culture GCAGGCACTA (2) 1.1 0.0011 P8 GC+1d culture GTCAGGGGGC (3) 1.1 0.0011 P8 GC+SHH+1d culture TGAAACACTG (4) 17.6 0.0176 P8 GC+SHH+1d culture TTTCAAATAA 7 0.007 P8 GC+SHH+1d culture GGCTCAGGTG (4) 4.7 0.0047 P8 GC+SHH+1d culture ATGCTGTATA (3) 3.5 0.0035 P8 GC+SHH+1d culture AGGGGTCTGG 1.2 0.0012 P8 GC+SHH+1d culture CAGCCAGTAC (2) 1.2 0.0012 P8 GC+SHH+1d culture CTGCTGTCTG (5) 1.2 0.0012 P8 GC+SHH+1d culture CTGGTGTTTG (6) 1.2 0.0012 P8 GC+SHH+1d culture GCAGGCACTA (2) 1.2 0.0012 P8 GC+SHH+1d culture GTCAGGGGGA (3) 1.2 0.0012 P8 GC+SHH+1d culture GTCAGGGGGC (3) 1.2 0.0012 3T3 fibroblasts TGAAACACTG (4) 3.5 0.0035 E15 cortex GTCAGGGGGC (3) 9.9 0.0099 E15 cortex GCAGGCACTA (2) 4.9 0.0049 E15 cortex TGAAACACTG (4) 4.9 0.0049 P1 cortex AGGGGTCTGG 4.5 0.0045 P1 cortex CCCTGAGCCA (5) 4.5 0.0045 Hypothalamus TGAAACACTG (4) 3.6 0.0036 Hypothalamus AGGGGTCTGG 1.8 0.0018 Hypothalamus GCAGGCACTA (2) 1.8 0.0018 Hypothalamus GGCTCAGGTG (4) 1.8 0.0018 Hypothalamus GTCAGGGGGA (3) 1.8 0.0018 Hypothalamus TTTCAAATAA 1.8 0.0018 E12.5 retina TGAAACACTG (4) 5.6 0.0056 E12.5 retina GGCTCAGGTG (4) 3.8 0.0038 E12.5 retina TTTCAAATAA 3.8 0.0038 E12.5 retina GTCAGGGGGC (3) 1.9 0.0019 E14.5 retina TTTCAAATAA 14.6 0.0146 E14.5 retina GTCAGGGGGC (3) 3.6 0.0036 E14.5 retina TGAAACACTG (4) 3.6 0.0036 E14.5 retina ATGCTGTATA (3) 1.8 0.0018 E16.5 retina TTTCAAATAA 9.1 0.0091 E16.5 retina TGAAACACTG (4) 7.2 0.0072 E16.5 retina CTGCTGTCTG (5) 1.8 0.0018 E16.5 retina GTCAGGGGGC (3) 1.8 0.0018 E18.5 retina TGAAACACTG (4) 18.2 0.0182 E18.5 retina TATGTAAAGA 3.6 0.0036 E18.5 retina TTTCAAATAA 3.6 0.0036 E18.5 retina CAGCCAGTAC (2) 1.8 0.0018 P0.5 retina TGAAACACTG (4) 7.9 0.0079 P0.5 retina CCCTGAGCCA (5) 2 0.002 P0.5 retina GGCTCAGGTG (4) 2 0.002 P0.5 retina GTCAGGGGGC (3) 2 0.002 P0.5 retina TATGTAAAGA 2 0.002 P0.5 retina TTTCAAATAA 2 0.002 P2.5 retina TGAAACACTG (4) 21.1 0.0211 P2.5 retina TTTCAAATAA 5.3 0.0053 P2.5 retina GGCTCAGGTG (4) 1.8 0.0018 P2.5 retina GTCAGGGGGC (3) 1.8 0.0018 P4.5 retina TGAAACACTG (4) 31.7 0.0317 P4.5 retina TTTCAAATAA 4 0.004 P4.5 retina GTCAGGGGGA (3) 2 0.002 P4.5 retina GTCAGGGGGC (3) 2 0.002 P4.5 retina TGGCCAAGAT (4) 2 0.002 P6.5 retina TGAAACACTG (4) 15 0.015 P6.5 retina TTTCAAATAA 6.7 0.0067 P6.5 retina GGCTCAGGTG (4) 5 0.005 P6.5 retina CAGCCAGTAC (2) 3.3 0.0033 P6.5 retina CTGCTGTCTG (5) 3.3 0.0033 P6.5 retina GTCAGGGGGC (3) 3.3 0.0033 P6.5 retina GTCAGGGGGA (3) 1.7 0.0017 P10.5 crx- retina TGAAACACTG (4) 7.4 0.0074 P10.5 crx- retina TTTCAAATAA 3.7 0.0037 P10.5 crx+ retina TGAAACACTG (4) 13.5 0.0135 P10.5 crx+ retina GTCAGGGGGC (3) 5.8 0.0058 P10.5 crx+ retina TTTCAAATAA 3.8 0.0038 P10.5 crx+ retina ATGCTGTATA (3) 1.9 0.0019 Adult retinal TGAAACACTG (4) 13 0.013 Adult retinal CAGCCAGTAC (2) 1.9 0.0019 Adult retinal CTGGTGTTTG (6) 1.9 0.0019 Adult retinal TTTCAAATAA 1.9 0.0019 ONL TGAAACACTG (4) 3.8 0.0038