Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.226704	C77190	expressed sequence C77190	5		97214
Mm.226704	B230208N19Rik	RIKEN cDNA B230208N19 gene	5		320243
Mm.226704	C230036F13Rik	RIKEN cDNA C230036F13 gene	5		320370
Mm.226704	Gabrb1	gamma-aminobutyric acid (GABA-A) receptor, subunit beta 1	5	5 40.0 cM	14400
Gene Ontology	chloride transport | extracellular ligand-gated ion channel activity | extracellular space | GABA-A receptor activity | gamma-aminobutyric acid signaling pathway | integral to membrane | integral to plasma membrane | ion channel activity | ion transport | membrane | neurotransmitter receptor activity | postsynaptic membrane | synaptic transmission | transport
Human Homolog	GABRB1[gamma-aminobutyric acid (GABA) A receptor, beta 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 22 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAACTGCAGG (10) 1.6 0.0016 Cb medulloblastoma ATGCCAAAAA (4) 4.6 0.0046 Cb medulloblastoma TCTAAAATTT (6) 2.3 0.0023 P8 GC+1d culture GAACTGCAGG (10) 2.3 0.0023 P8 GC+1d culture TCTAAAATTT (6) 1.1 0.0011 P8 GC+SHH+1d culture GAACTGCAGG (10) 2.3 0.0023 E15 cortex GAACTGCAGG (10) 9.9 0.0099 P1 cortex GAACTGCAGG (10) 9.1 0.0091 Hypothalamus ATGCCAAAAA (4) 3.6 0.0036 E12.5 retina GAACTGCAGG (10) 1.9 0.0019 E14.5 retina GAACTGCAGG (10) 1.8 0.0018 E16.5 retina AAAACAAAAG (14) 3.6 0.0036 E16.5 retina GAACTGCAGG (10) 1.8 0.0018 E18.5 retina GAACTGCAGG (10) 1.8 0.0018 P0.5 retina AGGTGAAATG (5) 2 0.002 P0.5 retina GAACTGCAGG (10) 2 0.002 P4.5 retina AGGTGAAATG (5) 2 0.002 P10.5 crx- retina AAAACAAAAG (14) 1.9 0.0019 P10.5 crx+ retina GAACTGCAGG (10) 3.8 0.0038 Adult retinal AGGTGAAATG (5) 1.9 0.0019 Adult retinal GAACTGCAGG (10) 1.9 0.0019 ONL AAAACAAAAG (14) 1.9 0.0019