Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.22690	Nr1h3	nuclear receptor subfamily 1, group H, member 3	2	2 40.4 cM	22259
Gene Ontology	copper ion binding | DNA binding | electron transport | electron transporter activity | ligand-dependent nuclear receptor activity | negative regulation of transcription | nucleus | receptor activity | regulation of transcription, DNA-dependent | steroid hormone receptor activity | transcription factor activity | transcription regulator activity
Human Homolog	NR1H3[nuclear receptor subfamily 1, group H, member 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 18 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATGAGTACAG (2) 1.6 0.0016 Cb medulloblastoma AGGGAGGAGT (5) 2.3 0.0023 P8 GC+1d culture ATGAGTACAG (2) 2.3 0.0023 P8 GC+SHH+1d culture ATGAGTACAG (2) 2.3 0.0023 3T3 fibroblasts AGGGAGGAGT (5) 3.5 0.0035 E15 cortex AGGGAGGAGT (5) 4.9 0.0049 P1 cortex GCGAAGGCTC 4.5 0.0045 E14.5 retina ATGAGTACAG (2) 3.6 0.0036 E16.5 retina ATGAGTACAG (2) 3.6 0.0036 P0.5 retina ATGAGTACAG (2) 2 0.002 P0.5 retina CTTCTGGAGA (6) 2 0.002 P2.5 retina ATGAGTACAG (2) 1.8 0.0018 P2.5 retina GCGAAGGCTC 1.8 0.0018 P4.5 retina ATGAGTACAG (2) 2 0.002 P4.5 retina GCGAAGGCTC 2 0.002 P10.5 crx- retina ATGAGTACAG (2) 7.4 0.0074 P10.5 crx- retina CTTCTGGAGA (6) 5.6 0.0056 ONL ATGAGTACAG (2) 3.8 0.0038