Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.22700	Gtf2h1	general transcription factor II H, polypeptide 1	7		14884
Gene Ontology	DNA repair | nucleus | regulation of transcription, DNA-dependent | transcription factor activity
Human Homolog	GTF2H1[general transcription factor IIH, polypeptide 1, 62kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 50 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAAAAAAAAA (196) 47.3 0.0473 P8 Cb GC TGCTTTGAAA (5) 1.6 0.0016 Cb medulloblastoma TAAAAAAAAA (196) 106.4 0.1064 Cb medulloblastoma TGCTTTGAAA (5) 6.9 0.0069 Cb medulloblastoma TATATGTATT 2.3 0.0023 P8 GC+1d culture TAAAAAAAAA (196) 66.2 0.0662 P8 GC+1d culture TGCTTTGAAA (5) 6.8 0.0068 P8 GC+SHH+1d culture TAAAAAAAAA (196) 93.7 0.0937 P8 GC+SHH+1d culture TGCTTTGAAA (5) 7 0.007 P8 GC+SHH+1d culture TACACATACA (4) 1.2 0.0012 3T3 fibroblasts TAAAAAAAAA (196) 7 0.007 3T3 fibroblasts TGCTTTGAAA (5) 3.5 0.0035 E15 cortex TAAAAAAAAA (196) 9.9 0.0099 E15 cortex TGCTTTGAAA (5) 4.9 0.0049 P1 cortex TAAAAAAAAA (196) 50 0.05 P1 cortex TGCTTTGAAA (5) 9.1 0.0091 P1 cortex TATATGTATT 4.5 0.0045 Hypothalamus TAAAAAAAAA (196) 32.6 0.0326 Hypothalamus GAGTTCCTGG (4) 3.6 0.0036 Hypothalamus TATATGTATT 1.8 0.0018 Hypothalamus TGCTTTGAAA (5) 1.8 0.0018 E12.5 retina TAAAAAAAAA (196) 24.4 0.0244 E14.5 retina TAAAAAAAAA (196) 41.9 0.0419 E14.5 retina TATATGTATT 1.8 0.0018 E14.5 retina TGCTTTGAAA (5) 1.8 0.0018 E16.5 retina TAAAAAAAAA (196) 23.5 0.0235 E16.5 retina TGCTTTGAAA (5) 3.6 0.0036 E16.5 retina GAGTTCCTGG (4) 1.8 0.0018 E18.5 retina TAAAAAAAAA (196) 107.3 0.1073 E18.5 retina TGCTTTGAAA (5) 3.6 0.0036 E18.5 retina TATATGTATT 1.8 0.0018 P0.5 retina TAAAAAAAAA (196) 37.3 0.0373 P2.5 retina TAAAAAAAAA (196) 72.2 0.0722 P2.5 retina TGCTTTGAAA (5) 10.6 0.0106 P2.5 retina TATATGTATT 3.5 0.0035 P4.5 retina TAAAAAAAAA (196) 122.8 0.1228 P4.5 retina TGCTTTGAAA (5) 5.9 0.0059 P6.5 retina TAAAAAAAAA (196) 63.4 0.0634 P6.5 retina TGCTTTGAAA (5) 1.7 0.0017 P10.5 crx- retina TAAAAAAAAA (196) 9.3 0.0093 P10.5 crx- retina GAGTTCCTGG (4) 1.9 0.0019 P10.5 crx- retina TACACATACA (4) 1.9 0.0019 P10.5 crx- retina TATATGTATT 1.9 0.0019 P10.5 crx- retina TGCTTTGAAA (5) 1.9 0.0019 P10.5 crx+ retina TAAAAAAAAA (196) 25 0.025 P10.5 crx+ retina TGCTTTGAAA (5) 9.6 0.0096 P10.5 crx+ retina TACACATACA (4) 1.9 0.0019 Adult retinal TAAAAAAAAA (196) 18.5 0.0185 ONL TAAAAAAAAA (196) 28.7 0.0287 ONL TACACATACA (4) 1.9 0.0019