Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.227176	AI647874	expressed sequence AI647874	17		106629
Mm.227176	Slc3a1	solute carrier family 3, member 1	17	17 51.0 cM	20532
Mm.227176	D030028O16Rik	RIKEN cDNA D030028O16 gene	17		213760
Human Homolog	KIAA0436[putative prolyl oligopeptidase]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 95 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCACAGAGCT (6) 22.8 0.0228 P8 Cb GC CTGCACCAAT (4) 3.3 0.0033 P8 Cb GC CTGGCTTCTT (7) 3.3 0.0033 P8 Cb GC GTGGTGGTTT (10) 3.3 0.0033 P8 Cb GC AATGGCATCA (6) 1.6 0.0016 P8 Cb GC GAGTAGACTC (4) 1.6 0.0016 Cb medulloblastoma CATAAAGATT (8) 9.2 0.0092 Cb medulloblastoma CCACAGAGCT (6) 9.2 0.0092 Cb medulloblastoma AATATTTCAA (4) 2.3 0.0023 Cb medulloblastoma AATGGCATCA (6) 2.3 0.0023 Cb medulloblastoma ATCACCAAAA (6) 2.3 0.0023 Cb medulloblastoma CCTGAAGGAA (4) 2.3 0.0023 Cb medulloblastoma CTGCACCAAT (4) 2.3 0.0023 Cb medulloblastoma GAGTAGACTC (4) 2.3 0.0023 P8 GC+1d culture CCACAGAGCT (6) 43.4 0.0434 P8 GC+1d culture CTGGCTTCTT (7) 4.6 0.0046 P8 GC+1d culture CTGCACCAAT (4) 3.4 0.0034 P8 GC+1d culture AATATTTCAA (4) 1.1 0.0011 P8 GC+1d culture ATCACCAAAA (6) 1.1 0.0011 P8 GC+SHH+1d culture CCACAGAGCT (6) 19.9 0.0199 P8 GC+SHH+1d culture CTGGCTTCTT (7) 9.4 0.0094 P8 GC+SHH+1d culture AATATTTCAA (4) 3.5 0.0035 P8 GC+SHH+1d culture AATGGCATCA (6) 1.2 0.0012 P8 GC+SHH+1d culture AGCGAACATT (4) 1.2 0.0012 P8 GC+SHH+1d culture CTGCACCAAT (4) 1.2 0.0012 3T3 fibroblasts CTGGCTTCTT (7) 17.5 0.0175 3T3 fibroblasts CCACAGAGCT (6) 10.5 0.0105 3T3 fibroblasts AATGGCATCA (6) 7 0.007 3T3 fibroblasts GTGGTGGTTT (10) 3.5 0.0035 E15 cortex CCACAGAGCT (6) 39.6 0.0396 E15 cortex AGCGAACATT (4) 4.9 0.0049 P1 cortex CTGGCTTCTT (7) 36.4 0.0364 P1 cortex CCACAGAGCT (6) 18.2 0.0182 P1 cortex CATAAAGATT (8) 9.1 0.0091 P1 cortex CCTGAAGGAA (4) 4.5 0.0045 P1 cortex CTGCACCAAT (4) 4.5 0.0045 Hypothalamus CCACAGAGCT (6) 16.3 0.0163 Hypothalamus AATATTTCAA (4) 5.4 0.0054 Hypothalamus CATAAAGATT (8) 3.6 0.0036 Hypothalamus AGCGAACATT (4) 1.8 0.0018 Hypothalamus GAGTAGACTC (4) 1.8 0.0018 Hypothalamus TTAACTGAAG (9) 1.8 0.0018 E12.5 retina CCACAGAGCT (6) 16.9 0.0169 E12.5 retina CTGGCTTCTT (7) 1.9 0.0019 E14.5 retina CCACAGAGCT (6) 31 0.031 E14.5 retina AATGGCATCA (6) 1.8 0.0018 E14.5 retina ATCACCAAAA (6) 1.8 0.0018 E14.5 retina CATAAAGATT (8) 1.8 0.0018 E14.5 retina CTGGCTTCTT (7) 1.8 0.0018 E14.5 retina TGTCATCTAA (3) 1.8 0.0018 E16.5 retina CCACAGAGCT (6) 50.7 0.0507 E16.5 retina AATATTTCAA (4) 1.8 0.0018 E16.5 retina GAGTAGACTC (4) 1.8 0.0018 E16.5 retina TTAACTGAAG (9) 1.8 0.0018 E18.5 retina CCACAGAGCT (6) 27.3 0.0273 E18.5 retina CATAAAGATT (8) 1.8 0.0018 E18.5 retina CTGGCTTCTT (7) 1.8 0.0018 P0.5 retina CCACAGAGCT (6) 29.4 0.0294 P0.5 retina CTGGCTTCTT (7) 11.8 0.0118 P0.5 retina CATAAAGATT (8) 5.9 0.0059 P0.5 retina GAGTAGACTC (4) 2 0.002 P0.5 retina TGTCATCTAA (3) 2 0.002 P2.5 retina CCACAGAGCT (6) 22.9 0.0229 P2.5 retina CTGGCTTCTT (7) 7 0.007 P2.5 retina CATAAAGATT (8) 3.5 0.0035 P4.5 retina CCACAGAGCT (6) 23.8 0.0238 P4.5 retina CATAAAGATT (8) 4 0.004 P4.5 retina CTGGCTTCTT (7) 4 0.004 P4.5 retina AATATTTCAA (4) 2 0.002 P4.5 retina GTGGTGGTTT (10) 2 0.002 P6.5 retina CCACAGAGCT (6) 28.3 0.0283 P6.5 retina CATAAAGATT (8) 6.7 0.0067 P6.5 retina AATATTTCAA (4) 3.3 0.0033 P6.5 retina CTGGCTTCTT (7) 3.3 0.0033 P6.5 retina TGAACTGAAG (6) 1.7 0.0017 P10.5 crx- retina CCACAGAGCT (6) 61.3 0.0613 P10.5 crx- retina CATAAAGATT (8) 9.3 0.0093 P10.5 crx- retina AATATTTCAA (4) 1.9 0.0019 P10.5 crx- retina AGCGAACATT (4) 1.9 0.0019 P10.5 crx- retina GAGTAGACTC (4) 1.9 0.0019 P10.5 crx- retina GTGGTGGTTT (10) 1.9 0.0019 P10.5 crx+ retina CCACAGAGCT (6) 15.4 0.0154 P10.5 crx+ retina ATCACCAAAA (6) 3.8 0.0038 P10.5 crx+ retina CATAAAGATT (8) 3.8 0.0038 Adult retinal CCACAGAGCT (6) 14.8 0.0148 Adult retinal CATAAAGATT (8) 9.3 0.0093 Adult retinal CTGCACCAAT (4) 3.7 0.0037 Adult retinal CTGGCTTCTT (7) 3.7 0.0037 Adult retinal AATATTTCAA (4) 1.9 0.0019 ONL CCACAGAGCT (6) 7.7 0.0077 ONL CATAAAGATT (8) 5.7 0.0057 ONL AATATTTCAA (4) 1.9 0.0019 ONL AATGGCATCA (6) 1.9 0.0019 ONL TGTCATCTAA (3) 1.9 0.0019 ONL TTAACTGAAG (9) 1.9 0.0019