Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.227258	Ilf2	interleukin enhancer binding factor 2	3		67781
Gene Ontology	biological_process unknown | DNA binding | nucleolus | nucleus | protein binding
Human Homolog	ILF2[interleukin enhancer binding factor 2, 45kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 130 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTAATCC (355) 52.2 0.0522 P8 Cb GC GTGACTCACA (25) 14.7 0.0147 P8 Cb GC TCCTGAACCC (4) 13.1 0.0131 P8 Cb GC AGAATGTGAG (2) 3.3 0.0033 P8 Cb GC GGGCTTTAGA 3.3 0.0033 P8 Cb GC CACTGAGCTC (4) 1.6 0.0016 P8 Cb GC CCCGCTGGTT 1.6 0.0016 P8 Cb GC GAGGCTTTAG 1.6 0.0016 P8 Cb GC GGGTTCCCCT (8) 1.6 0.0016 Cb medulloblastoma CCTTTAATCC (355) 41.6 0.0416 Cb medulloblastoma GTGACTCACA (25) 25.4 0.0254 Cb medulloblastoma CACTGAGCTC (4) 4.6 0.0046 Cb medulloblastoma GAGGCTTTAG 4.6 0.0046 Cb medulloblastoma TGGGCGCTAA (2) 4.6 0.0046 Cb medulloblastoma GGGTTCCCCT (8) 2.3 0.0023 Cb medulloblastoma TCTCAAAATA 2.3 0.0023 P8 GC+1d culture CCTTTAATCC (355) 32 0.032 P8 GC+1d culture GTGACTCACA (25) 14.8 0.0148 P8 GC+1d culture TCCTGAACCC (4) 10.3 0.0103 P8 GC+1d culture AGGAAGGGTG (2) 1.1 0.0011 P8 GC+1d culture GGGCTTTAGA 1.1 0.0011 P8 GC+1d culture TGGGCGCTAA (2) 1.1 0.0011 P8 GC+SHH+1d culture CCTTTAATCC (355) 25.8 0.0258 P8 GC+SHH+1d culture GTGACTCACA (25) 16.4 0.0164 P8 GC+SHH+1d culture GGGCTTTAGA 5.9 0.0059 P8 GC+SHH+1d culture TCCTGAACCC (4) 5.9 0.0059 P8 GC+SHH+1d culture CACTGAGCTC (4) 2.3 0.0023 P8 GC+SHH+1d culture AGGAAGGGTG (2) 1.2 0.0012 P8 GC+SHH+1d culture CCCGCCTGGT (2) 1.2 0.0012 3T3 fibroblasts CCTTTAATCC (355) 70.1 0.0701 3T3 fibroblasts GTGACTCACA (25) 35 0.035 3T3 fibroblasts GGGTTCCCCT (8) 28 0.028 3T3 fibroblasts GGGCTTTAGA 7 0.007 3T3 fibroblasts CCCGCTGGTT 3.5 0.0035 3T3 fibroblasts TGGGCGCTAA (2) 3.5 0.0035 E15 cortex CCTTTAATCC (355) 54.4 0.0544 E15 cortex GTGACTCACA (25) 19.8 0.0198 E15 cortex GGGCTTTAGA 9.9 0.0099 E15 cortex CCCGCTGGTT 4.9 0.0049 E15 cortex TCCTGAACCC (4) 4.9 0.0049 P1 cortex CCTTTAATCC (355) 154.5 0.1545 P1 cortex GGGCTTTAGA 18.2 0.0182 P1 cortex GTGACTCACA (25) 13.6 0.0136 P1 cortex TCCTGAACCC (4) 13.6 0.0136 Hypothalamus GTGACTCACA (25) 21.7 0.0217 Hypothalamus CCTTTAATCC (355) 19.9 0.0199 Hypothalamus TCCTGAACCC (4) 7.2 0.0072 Hypothalamus AGAATGTGAG (2) 1.8 0.0018 Hypothalamus AGGAAGGGTG (2) 1.8 0.0018 Hypothalamus CACTGAGCTC (4) 1.8 0.0018 Hypothalamus GGGCTTTAGA 1.8 0.0018 E12.5 retina CCTTTAATCC (355) 75.1 0.0751 E12.5 retina GTGACTCACA (25) 35.7 0.0357 E12.5 retina TCCTGAACCC (4) 9.4 0.0094 E12.5 retina GGGCTTTAGA 7.5 0.0075 E12.5 retina CACTGAGCTC (4) 3.8 0.0038 E12.5 retina TGGGCGCTAA (2) 3.8 0.0038 E12.5 retina AGAATGTGAG (2) 1.9 0.0019 E12.5 retina GAGACTCAGG 1.9 0.0019 E12.5 retina TCTCAAAATA 1.9 0.0019 E14.5 retina CCTTTAATCC (355) 120.3 0.1203 E14.5 retina GTGACTCACA (25) 45.5 0.0455 E14.5 retina TCCTGAACCC (4) 16.4 0.0164 E14.5 retina GGGCTTTAGA 3.6 0.0036 E14.5 retina GAGACTCAGG 1.8 0.0018 E14.5 retina GGGTTCCCCT (8) 1.8 0.0018 E14.5 retina TCTCAAAATA 1.8 0.0018 E14.5 retina TGGGCGCTAA (2) 1.8 0.0018 E16.5 retina CCTTTAATCC (355) 68.8 0.0688 E16.5 retina GTGACTCACA (25) 29 0.029 E16.5 retina TCCTGAACCC (4) 14.5 0.0145 E16.5 retina AGAATGTGAG (2) 1.8 0.0018 E16.5 retina CACTGAGCTC (4) 1.8 0.0018 E16.5 retina GGGTTCCCCT (8) 1.8 0.0018 E16.5 retina TCTCAAAATA 1.8 0.0018 E18.5 retina TCCTGAACCC (4) 32.7 0.0327 E18.5 retina GTGACTCACA (25) 27.3 0.0273 E18.5 retina CCTTTAATCC (355) 23.6 0.0236 P0.5 retina CCTTTAATCC (355) 72.6 0.0726 P0.5 retina GTGACTCACA (25) 29.4 0.0294 P0.5 retina GGGCTTTAGA 11.8 0.0118 P0.5 retina TCCTGAACCC (4) 7.9 0.0079 P2.5 retina CCTTTAATCC (355) 70.4 0.0704 P2.5 retina GTGACTCACA (25) 24.6 0.0246 P2.5 retina TCCTGAACCC (4) 15.8 0.0158 P2.5 retina GGGCTTTAGA 7 0.007 P2.5 retina GGGTTCCCCT (8) 7 0.007 P2.5 retina CACTGAGCTC (4) 5.3 0.0053 P2.5 retina CCCGCCTGGT (2) 1.8 0.0018 P2.5 retina CCCGCTGGTT 1.8 0.0018 P2.5 retina TGGGCGCTAA (2) 1.8 0.0018 P4.5 retina CCTTTAATCC (355) 43.6 0.0436 P4.5 retina GTGACTCACA (25) 27.7 0.0277 P4.5 retina GGGCTTTAGA 7.9 0.0079 P4.5 retina TCCTGAACCC (4) 7.9 0.0079 P4.5 retina CACTGAGCTC (4) 2 0.002 P4.5 retina GAGGCTTTAG 2 0.002 P6.5 retina CCTTTAATCC (355) 70 0.07 P6.5 retina GTGACTCACA (25) 26.7 0.0267 P6.5 retina TCCTGAACCC (4) 10 0.01 P6.5 retina GGGTTCCCCT (8) 5 0.005 P6.5 retina AGGAAGGGTG (2) 1.7 0.0017 P6.5 retina CACTGAGCTC (4) 1.7 0.0017 P6.5 retina CCCGCTGGTT 1.7 0.0017 P6.5 retina GGGCTTTAGA 1.7 0.0017 P10.5 crx- retina CCTTTAATCC (355) 63.2 0.0632 P10.5 crx- retina GTGACTCACA (25) 26 0.026 P10.5 crx- retina GGGTTCCCCT (8) 7.4 0.0074 P10.5 crx- retina TCCTGAACCC (4) 5.6 0.0056 P10.5 crx+ retina CCTTTAATCC (355) 38.4 0.0384 P10.5 crx+ retina GTGACTCACA (25) 30.8 0.0308 P10.5 crx+ retina TGGGCGCTAA (2) 5.8 0.0058 P10.5 crx+ retina GGGCTTTAGA 3.8 0.0038 P10.5 crx+ retina TCCTGAACCC (4) 3.8 0.0038 P10.5 crx+ retina AGAATGTGAG (2) 1.9 0.0019 P10.5 crx+ retina AGGAAGGGTG (2) 1.9 0.0019 P10.5 crx+ retina CACTGAGCTC (4) 1.9 0.0019 Adult retinal CCTTTAATCC (355) 129.6 0.1296 Adult retinal GTGACTCACA (25) 33.3 0.0333 Adult retinal CACTGAGCTC (4) 1.9 0.0019 Adult retinal CCCGCTGGTT 1.9 0.0019 Adult retinal TCCTGAACCC (4) 1.9 0.0019 Adult retinal TCTCAAAATA 1.9 0.0019 ONL CCTTTAATCC (355) 84.3 0.0843 ONL GTGACTCACA (25) 34.5 0.0345 ONL CCCGCCTGGT (2) 3.8 0.0038 ONL TCCTGAACCC (4) 3.8 0.0038 ONL TGGGCGCTAA (2) 3.8 0.0038 ONL GAGACTCAGG 1.9 0.0019 ONL GGGCTTTAGA 1.9 0.0019