Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.227456
4930546H06Rik
RIKEN cDNA 4930546H06 gene
17
75202
Mm.227456
9530079D04Rik
RIKEN cDNA 9530079D04 gene
17
320061
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 35 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGTGTTCCCA (
4
)
3.3
0.0033
P8 Cb GC
CCTCTTCCCC (
4
)
1.6
0.0016
Cb medulloblastoma
CCTCTTCCCC (
4
)
6.9
0.0069
Cb medulloblastoma
TGTGTTCCCA (
4
)
2.3
0.0023
P8 GC+1d culture
TGTGTTCCCA (
4
)
6.8
0.0068
P8 GC+1d culture
CCTCTTCCCC (
4
)
5.7
0.0057
P8 GC+SHH+1d culture
TGTGTTCCCA (
4
)
5.9
0.0059
P8 GC+SHH+1d culture
CCTCTTCCCC (
4
)
1.2
0.0012
3T3 fibroblasts
TGTGTTCCCA (
4
)
7
0.007
P1 cortex
TGTGTTCCCA (
4
)
9.1
0.0091
P1 cortex
AGTCCTGATT
(
3
)
4.5
0.0045
Hypothalamus
TGTGTTCCCA (
4
)
1.8
0.0018
E14.5 retina
TGTGTTCCCA (
4
)
3.6
0.0036
E14.5 retina
TTTTATAGTT
(
2
)
1.8
0.0018
E16.5 retina
TGTGTTCCCA (
4
)
3.6
0.0036
E16.5 retina
CCTCTTCCCC (
4
)
1.8
0.0018
E16.5 retina
TTTTATAGTT
(
2
)
1.8
0.0018
E18.5 retina
CCTCTTCCCC (
4
)
1.8
0.0018
P2.5 retina
CCTCTTCCCC (
4
)
7
0.007
P2.5 retina
AGTCCTGATT
(
3
)
1.8
0.0018
P4.5 retina
CCTCTTCCCC (
4
)
7.9
0.0079
P6.5 retina
CCTCTTCCCC (
4
)
5
0.005
P6.5 retina
AACTTCTCAT
(
2
)
3.3
0.0033
P6.5 retina
TGTGTTCCCA (
4
)
3.3
0.0033
P6.5 retina
AGTCCTGATT
(
3
)
1.7
0.0017
P10.5 crx- retina
CCTCTTCCCC (
4
)
5.6
0.0056
P10.5 crx- retina
TGTGTTCCCA (
4
)
5.6
0.0056
P10.5 crx+ retina
CCTCTTCCCC (
4
)
3.8
0.0038
P10.5 crx+ retina
AACTTCTCAT
(
2
)
1.9
0.0019
P10.5 crx+ retina
TGTGTTCCCA (
4
)
1.9
0.0019
Adult retinal
TGTGTTCCCA (
4
)
7.4
0.0074
Adult retinal
CCTCTTCCCC (
4
)
3.7
0.0037
ONL
CCTCTTCCCC (
4
)
5.7
0.0057
ONL
AGTCCTGATT
(
3
)
1.9
0.0019
ONL
TGTGTTCCCA (
4
)
1.9
0.0019
