Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.227484	D030041H20Rik	RIKEN cDNA D030041H20 gene	14		320036
Mm.227484	C130026E14	hypothetical protein C130026E14	14		328364
Mm.227484	BC065120	cDNA sequence BC065120	14		328365
Human Homolog	RAI17[retinoic acid induced 17]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 91 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATCACAGGTG (7) 3.3 0.0033 P8 Cb GC AGAGGCACCC (5) 1.6 0.0016 P8 Cb GC AGTCCCATCT (3) 1.6 0.0016 P8 Cb GC AGTTCAATTC (6) 1.6 0.0016 P8 Cb GC CAACAAAACC (8) 1.6 0.0016 P8 Cb GC TGGTGTGTGT (8) 1.6 0.0016 P8 Cb GC TTAATTTTTT (6) 1.6 0.0016 Cb medulloblastoma CAACAAAACC (8) 9.2 0.0092 Cb medulloblastoma ATATCAAAAA (4) 2.3 0.0023 Cb medulloblastoma TAGGTAAAAA (6) 2.3 0.0023 Cb medulloblastoma TTAATTTTTT (6) 2.3 0.0023 P8 GC+1d culture TTAATTTTTT (6) 9.1 0.0091 P8 GC+1d culture ATCACAGGTG (7) 4.6 0.0046 P8 GC+1d culture TAGGTAAAAA (6) 2.3 0.0023 P8 GC+1d culture TCAACAAGAT (4) 1.1 0.0011 P8 GC+1d culture TGGTGTGTGT (8) 1.1 0.0011 P8 GC+SHH+1d culture CAACAAAACC (8) 7 0.007 P8 GC+SHH+1d culture TTAATTTTTT (6) 3.5 0.0035 P8 GC+SHH+1d culture ATCACAGGTG (7) 2.3 0.0023 P8 GC+SHH+1d culture AGAGGCACCC (5) 1.2 0.0012 P8 GC+SHH+1d culture CAGGAAACTC (8) 1.2 0.0012 P8 GC+SHH+1d culture TACTATTTAC (3) 1.2 0.0012 P8 GC+SHH+1d culture TAGGTAAAAA (6) 1.2 0.0012 3T3 fibroblasts CACACAGTGC (8) 3.5 0.0035 E15 cortex AGTCCCATCT (3) 14.8 0.0148 P1 cortex AGTTCAATTC (6) 4.5 0.0045 P1 cortex CAACAAAACC (8) 4.5 0.0045 Hypothalamus CAACAAAACC (8) 29 0.029 Hypothalamus AGAGGCACCC (5) 1.8 0.0018 Hypothalamus ATATCAAAAA (4) 1.8 0.0018 Hypothalamus TCAACAAGAT (4) 1.8 0.0018 Hypothalamus TTAATTTTTT (6) 1.8 0.0018 E12.5 retina AGAGGCACCC (5) 3.8 0.0038 E12.5 retina CAACAAAACC (8) 3.8 0.0038 E12.5 retina AGTTCAATTC (6) 1.9 0.0019 E12.5 retina ATCACAGGTG (7) 1.9 0.0019 E12.5 retina TTAATTTTTT (6) 1.9 0.0019 E14.5 retina CAACAAAACC (8) 31 0.031 E14.5 retina AGAGGCACCC (5) 7.3 0.0073 E14.5 retina ATCACAGGTG (7) 3.6 0.0036 E14.5 retina CAGGAAACTC (8) 3.6 0.0036 E14.5 retina TGGTGTGTGT (8) 3.6 0.0036 E14.5 retina TTAATTTTTT (6) 3.6 0.0036 E14.5 retina AGCAAATGAG (3) 1.8 0.0018 E14.5 retina TCAACAAGAT (4) 1.8 0.0018 E16.5 retina CAACAAAACC (8) 47.1 0.0471 E16.5 retina TACTATTTAC (3) 3.6 0.0036 E16.5 retina AGAGGCACCC (5) 1.8 0.0018 E16.5 retina ATCACAGGTG (7) 1.8 0.0018 E16.5 retina CCGGAACCTT (3) 1.8 0.0018 E18.5 retina CAACAAAACC (8) 9.1 0.0091 E18.5 retina TTAATTTTTT (6) 7.3 0.0073 E18.5 retina ATCACAGGTG (7) 5.5 0.0055 E18.5 retina AGAGGCACCC (5) 1.8 0.0018 E18.5 retina CACACAGTGC (8) 1.8 0.0018 P0.5 retina CAACAAAACC (8) 7.9 0.0079 P0.5 retina ATCACAGGTG (7) 3.9 0.0039 P0.5 retina AGTTCAATTC (6) 2 0.002 P0.5 retina CCGGAACCTT (3) 2 0.002 P0.5 retina TAGGTAAAAA (6) 2 0.002 P2.5 retina ATCACAGGTG (7) 3.5 0.0035 P2.5 retina AGTTCAATTC (6) 1.8 0.0018 P2.5 retina CAACAAAACC (8) 1.8 0.0018 P2.5 retina CAGGAAACTC (8) 1.8 0.0018 P2.5 retina GGGGTCAGAT (3) 1.8 0.0018 P2.5 retina TCAACAAGAT (4) 1.8 0.0018 P2.5 retina TTAATTTTTT (6) 1.8 0.0018 P4.5 retina CAACAAAACC (8) 13.9 0.0139 P4.5 retina TTAATTTTTT (6) 7.9 0.0079 P4.5 retina AGTTCAATTC (6) 4 0.004 P4.5 retina AGAGGCACCC (5) 2 0.002 P4.5 retina CAGGAAACTC (8) 2 0.002 P6.5 retina AGAGGCACCC (5) 3.3 0.0033 P6.5 retina ATATCAAAAA (4) 1.7 0.0017 P6.5 retina CAACAAAACC (8) 1.7 0.0017 P6.5 retina CCGGAACCTT (3) 1.7 0.0017 P6.5 retina TTAATTTTTT (6) 1.7 0.0017 P10.5 crx- retina CAACAAAACC (8) 33.4 0.0334 P10.5 crx- retina ATCACAGGTG (7) 3.7 0.0037 P10.5 crx- retina GCAGTATGTT (3) 3.7 0.0037 P10.5 crx- retina AGCAAATGAG (3) 1.9 0.0019 P10.5 crx- retina AGTTCAATTC (6) 1.9 0.0019 P10.5 crx+ retina CAACAAAACC (8) 7.7 0.0077 P10.5 crx+ retina CACACAGTGC (8) 1.9 0.0019 P10.5 crx+ retina GCAGTATGTT (3) 1.9 0.0019 P10.5 crx+ retina TTAATTTTTT (6) 1.9 0.0019 Adult retinal CAACAAAACC (8) 5.6 0.0056 Adult retinal CAGGAAACTC (8) 3.7 0.0037 Adult retinal GGGGTCAGAT (3) 3.7 0.0037 Adult retinal AGCAAATGAG (3) 1.9 0.0019 ONL AGTTCAATTC (6) 7.7 0.0077