Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.227925	D2Wsu131e	DNA segment, Chr 2, Wayne State University 131, expressed	2	2 80.0 cM	28033
Mm.227925	Csrp2bp	cysteine and glycine-rich protein 2 binding protein	2	2 80.0 cM	228714
Gene Ontology	biological_process unknown | cellular_component unknown | molecular_function unknown
Human Homolog	CSRP2BP[CSRP2 binding protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 105 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTGCTGTACC (4) 13.1 0.0131 P8 Cb GC CACACACACA (106) 11.4 0.0114 P8 Cb GC CATTCTTCCT (2) 11.4 0.0114 P8 Cb GC TGGAGTTGGA (6) 3.3 0.0033 P8 Cb GC TTGGAGAAAG (5) 3.3 0.0033 P8 Cb GC GCAGCAAGAA (6) 1.6 0.0016 P8 Cb GC GCCTGGAAAA (4) 1.6 0.0016 Cb medulloblastoma CACACACACA (106) 32.4 0.0324 Cb medulloblastoma TTGGAGAAAG (5) 18.5 0.0185 Cb medulloblastoma CTGCTGTACC (4) 9.2 0.0092 Cb medulloblastoma CATTCTTCCT (2) 6.9 0.0069 Cb medulloblastoma TGGAGTTGGA (6) 6.9 0.0069 P8 GC+1d culture CATTCTTCCT (2) 18.3 0.0183 P8 GC+1d culture CTGCTGTACC (4) 18.3 0.0183 P8 GC+1d culture TGGAGTTGGA (6) 9.1 0.0091 P8 GC+1d culture CACACACACA (106) 6.8 0.0068 P8 GC+1d culture GAATTGAAAG (5) 3.4 0.0034 P8 GC+SHH+1d culture CTGCTGTACC (4) 19.9 0.0199 P8 GC+SHH+1d culture CATTCTTCCT (2) 12.9 0.0129 P8 GC+SHH+1d culture CACACACACA (106) 9.4 0.0094 P8 GC+SHH+1d culture GAATTGAAAG (5) 2.3 0.0023 P8 GC+SHH+1d culture GCAGCAAGAA (6) 1.2 0.0012 P8 GC+SHH+1d culture TGGAGTTGGA (6) 1.2 0.0012 P8 GC+SHH+1d culture TTGGAGAAAG (5) 1.2 0.0012 3T3 fibroblasts CACACACACA (106) 17.5 0.0175 3T3 fibroblasts CATTCTTCCT (2) 14 0.014 3T3 fibroblasts GCAGCAAGAA (6) 7 0.007 E15 cortex CACACACACA (106) 4.9 0.0049 E15 cortex CATTCTTCCT (2) 4.9 0.0049 E15 cortex GCAGCAAGAA (6) 4.9 0.0049 E15 cortex TGGAGTTGGA (6) 4.9 0.0049 P1 cortex CACACACACA (106) 27.3 0.0273 P1 cortex CTGCTGTACC (4) 9.1 0.0091 P1 cortex GCAGCAAGAA (6) 4.5 0.0045 Hypothalamus CACACACACA (106) 96 0.096 Hypothalamus TTGGAGAAAG (5) 9.1 0.0091 Hypothalamus CTGCTGTACC (4) 3.6 0.0036 Hypothalamus CATTCTTCCT (2) 1.8 0.0018 Hypothalamus GCAGCAAGAA (6) 1.8 0.0018 E12.5 retina CTGCTGTACC (4) 18.8 0.0188 E12.5 retina CATTCTTCCT (2) 11.3 0.0113 E12.5 retina CACACACACA (106) 3.8 0.0038 E12.5 retina GAATTGAAAG (5) 1.9 0.0019 E12.5 retina TGGAGTTGGA (6) 1.9 0.0019 E14.5 retina CTGCTGTACC (4) 27.3 0.0273 E14.5 retina CACACACACA (106) 18.2 0.0182 E14.5 retina CATTCTTCCT (2) 10.9 0.0109 E14.5 retina TGGAGTTGGA (6) 5.5 0.0055 E14.5 retina TTGGAGAAAG (5) 3.6 0.0036 E14.5 retina GCAGCAAGAA (6) 1.8 0.0018 E16.5 retina CTGCTGTACC (4) 65.2 0.0652 E16.5 retina CACACACACA (106) 12.7 0.0127 E16.5 retina CATTCTTCCT (2) 10.9 0.0109 E16.5 retina GCAGCAAGAA (6) 3.6 0.0036 E16.5 retina TTGGAGAAAG (5) 3.6 0.0036 E16.5 retina TGGAGTTGGA (6) 1.8 0.0018 E18.5 retina CTGCTGTACC (4) 20 0.02 E18.5 retina CATTCTTCCT (2) 10.9 0.0109 E18.5 retina CACACACACA (106) 5.5 0.0055 E18.5 retina TGGAGTTGGA (6) 5.5 0.0055 E18.5 retina GCAGCAAGAA (6) 3.6 0.0036 E18.5 retina TTGGAGAAAG (5) 1.8 0.0018 P0.5 retina CTGCTGTACC (4) 31.4 0.0314 P0.5 retina CATTCTTCCT (2) 9.8 0.0098 P0.5 retina CACACACACA (106) 7.9 0.0079 P0.5 retina GCAGCAAGAA (6) 5.9 0.0059 P0.5 retina TGGAGTTGGA (6) 3.9 0.0039 P2.5 retina CTGCTGTACC (4) 40.5 0.0405 P2.5 retina CACACACACA (106) 21.1 0.0211 P2.5 retina CATTCTTCCT (2) 15.8 0.0158 P2.5 retina GCAGCAAGAA (6) 1.8 0.0018 P2.5 retina TGGAGTTGGA (6) 1.8 0.0018 P2.5 retina TTGGAGAAAG (5) 1.8 0.0018 P4.5 retina CTGCTGTACC (4) 29.7 0.0297 P4.5 retina CATTCTTCCT (2) 9.9 0.0099 P4.5 retina CACACACACA (106) 7.9 0.0079 P4.5 retina TTGGAGAAAG (5) 4 0.004 P4.5 retina GCAGCAAGAA (6) 2 0.002 P4.5 retina TGGAGTTGGA (6) 2 0.002 P6.5 retina CTGCTGTACC (4) 21.7 0.0217 P6.5 retina CACACACACA (106) 8.3 0.0083 P6.5 retina CATTCTTCCT (2) 8.3 0.0083 P6.5 retina GCAGCAAGAA (6) 6.7 0.0067 P6.5 retina TGGAGTTGGA (6) 6.7 0.0067 P10.5 crx- retina CTGCTGTACC (4) 48.3 0.0483 P10.5 crx- retina CATTCTTCCT (2) 20.4 0.0204 P10.5 crx- retina CACACACACA (106) 5.6 0.0056 P10.5 crx- retina TGGAGTTGGA (6) 5.6 0.0056 P10.5 crx- retina TTGGAGAAAG (5) 3.7 0.0037 P10.5 crx- retina GCAGCAAGAA (6) 1.9 0.0019 P10.5 crx+ retina CTGCTGTACC (4) 23.1 0.0231 P10.5 crx+ retina TGGAGTTGGA (6) 9.6 0.0096 P10.5 crx+ retina CACACACACA (106) 7.7 0.0077 P10.5 crx+ retina CATTCTTCCT (2) 7.7 0.0077 P10.5 crx+ retina GCAGCAAGAA (6) 1.9 0.0019 P10.5 crx+ retina GCCTGGAAAA (4) 1.9 0.0019 Adult retinal CACACACACA (106) 16.7 0.0167 Adult retinal CATTCTTCCT (2) 16.7 0.0167 Adult retinal CTGCTGTACC (4) 9.3 0.0093 Adult retinal GCAGCAAGAA (6) 5.6 0.0056 ONL CACACACACA (106) 21.1 0.0211 ONL CATTCTTCCT (2) 11.5 0.0115 ONL CTGCTGTACC (4) 7.7 0.0077 ONL TTGGAGAAAG (5) 3.8 0.0038 ONL GAATTGAAAG (5) 1.9 0.0019