Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.228067	C330005L02Rik	RIKEN cDNA C330005L02 gene	9		192287
Gene Ontology	binding | integral to membrane | mitochondrial inner membrane | transport
Human Homolog	FLJ10618[hypothetical protein FLJ10618]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 128 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC CCAAATAAAA (2) 21.2 0.0212 P8 Cb GC GATAGATAAT (5) 21.2 0.0212 P8 Cb GC GCTGCAAATT 8.2 0.0082 P8 Cb GC GTGGGAGGAA (5) 1.6 0.0016 P8 Cb GC TCTGCCCTCC (2) 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma GATAGATAAT (5) 41.6 0.0416 Cb medulloblastoma CCAAATAAAA (2) 16.2 0.0162 Cb medulloblastoma ACAGAGATAA (2) 4.6 0.0046 Cb medulloblastoma GTGGGAGGAA (5) 4.6 0.0046 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture CCAAATAAAA (2) 27.4 0.0274 P8 GC+1d culture GATAGATAAT (5) 21.7 0.0217 P8 GC+1d culture GCTGCAAATT 11.4 0.0114 P8 GC+1d culture GTGGGAGGAA (5) 6.8 0.0068 P8 GC+1d culture AAGTTAAAAA (8) 1.1 0.0011 P8 GC+1d culture TAGCAGTCGG 1.1 0.0011 P8 GC+1d culture TCTGCCCTCC (2) 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture CCAAATAAAA (2) 46.8 0.0468 P8 GC+SHH+1d culture GATAGATAAT (5) 26.9 0.0269 P8 GC+SHH+1d culture GTGGGAGGAA (5) 4.7 0.0047 P8 GC+SHH+1d culture GCTGCAAATT 2.3 0.0023 P8 GC+SHH+1d culture TCTGCCCTCC (2) 2.3 0.0023 P8 GC+SHH+1d culture AAGTTAAAAA (8) 1.2 0.0012 P8 GC+SHH+1d culture ACAGAGATAA (2) 1.2 0.0012 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts CCAAATAAAA (2) 10.5 0.0105 3T3 fibroblasts GTGGGAGGAA (5) 7 0.007 3T3 fibroblasts GATAGATAAT (5) 3.5 0.0035 3T3 fibroblasts TCTGCCCTCC (2) 3.5 0.0035 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex CCAAATAAAA (2) 29.7 0.0297 E15 cortex GCTGCAAATT 9.9 0.0099 E15 cortex GATAGATAAT (5) 4.9 0.0049 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex CCAAATAAAA (2) 18.2 0.0182 P1 cortex TCCACTGGAA (4) 18.2 0.0182 P1 cortex GATAGATAAT (5) 9.1 0.0091 P1 cortex GCTGCAAATT 4.5 0.0045 P1 cortex GTGGGAGGAA (5) 4.5 0.0045 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus GATAGATAAT (5) 19.9 0.0199 Hypothalamus CCAAATAAAA (2) 14.5 0.0145 Hypothalamus TCTGCCCTCC (2) 5.4 0.0054 Hypothalamus TAGCAGTCGG 3.6 0.0036 Hypothalamus GCTGCAAATT 1.8 0.0018 Hypothalamus GTGGGAGGAA (5) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina CCAAATAAAA (2) 114.5 0.1145 E12.5 retina GATAGATAAT (5) 20.7 0.0207 E12.5 retina GTGGGAGGAA (5) 18.8 0.0188 E12.5 retina GCTGCAAATT 5.6 0.0056 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina CCAAATAAAA (2) 67.4 0.0674 E14.5 retina GATAGATAAT (5) 12.8 0.0128 E14.5 retina GCTGCAAATT 9.1 0.0091 E14.5 retina GTGGGAGGAA (5) 7.3 0.0073 E14.5 retina AAGTTAAAAA (8) 1.8 0.0018 E16.5 retina CCAAATAAAA (2) 157.6 0.1576 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina GATAGATAAT (5) 27.2 0.0272 E16.5 retina GTGGGAGGAA (5) 10.9 0.0109 E16.5 retina GCTGCAAATT 7.2 0.0072 E16.5 retina TCCACTGGAA (4) 5.4 0.0054 E16.5 retina AAGTTAAAAA (8) 1.8 0.0018 E16.5 retina TCTGCCCTCC (2) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina CCAAATAAAA (2) 245.6 0.2456 E18.5 retina GATAGATAAT (5) 29.1 0.0291 E18.5 retina GCTGCAAATT 3.6 0.0036 E18.5 retina TCTGCCCTCC (2) 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina CCAAATAAAA (2) 39.3 0.0393 P0.5 retina GTGGGAGGAA (5) 9.8 0.0098 P0.5 retina GATAGATAAT (5) 3.9 0.0039 P0.5 retina AAGTTAAAAA (8) 2 0.002 P0.5 retina TCCACTGGAA (4) 2 0.002 P0.5 retina TCTGCCCTCC (2) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina CCAAATAAAA (2) 160.1 0.1601 P2.5 retina GATAGATAAT (5) 17.6 0.0176 P2.5 retina GTGGGAGGAA (5) 7 0.007 P2.5 retina GCTGCAAATT 5.3 0.0053 P2.5 retina TCTGCCCTCC (2) 3.5 0.0035 P2.5 retina AAGTTAAAAA (8) 1.8 0.0018 P2.5 retina ACAGAGATAA (2) 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina CCAAATAAAA (2) 237.8 0.2378 P4.5 retina GATAGATAAT (5) 13.9 0.0139 P4.5 retina GTGGGAGGAA (5) 7.9 0.0079 P4.5 retina GCTGCAAATT 5.9 0.0059 P4.5 retina AAGTTAAAAA (8) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina CCAAATAAAA (2) 175.1 0.1751 P6.5 retina GATAGATAAT (5) 18.3 0.0183 P6.5 retina GTGGGAGGAA (5) 13.3 0.0133 P6.5 retina TCTGCCCTCC (2) 6.7 0.0067 P6.5 retina AAGTTAAAAA (8) 3.3 0.0033 P6.5 retina GCTGCAAATT 1.7 0.0017 P6.5 retina TCCACTGGAA (4) 1.7 0.0017 P10.5 crx- retina CCAAATAAAA (2) 144.9 0.1449 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina GATAGATAAT (5) 13 0.013 P10.5 crx- retina GCTGCAAATT 7.4 0.0074 P10.5 crx- retina GTGGGAGGAA (5) 3.7 0.0037 P10.5 crx- retina TAGCAGTCGG 1.9 0.0019 P10.5 crx- retina TCCACTGGAA (4) 1.9 0.0019 P10.5 crx+ retina CCAAATAAAA (2) 213.4 0.2134 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina GCTGCAAATT 11.5 0.0115 P10.5 crx+ retina GATAGATAAT (5) 9.6 0.0096 P10.5 crx+ retina GTGGGAGGAA (5) 7.7 0.0077 P10.5 crx+ retina TCCACTGGAA (4) 1.9 0.0019 Adult retinal CCAAATAAAA (2) 79.6 0.0796 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal GATAGATAAT (5) 11.1 0.0111 Adult retinal TCTGCCCTCC (2) 7.4 0.0074 Adult retinal GCTGCAAATT 5.6 0.0056 Adult retinal GTGGGAGGAA (5) 3.7 0.0037 Adult retinal TCCACTGGAA (4) 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL CCAAATAAAA (2) 63.2 0.0632 ONL GATAGATAAT (5) 24.9 0.0249 ONL GCTGCAAATT 3.8 0.0038 ONL AAGTTAAAAA (8) 1.9 0.0019 ONL GTGGGAGGAA (5) 1.9 0.0019