Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.229087	Ppp1r9b	protein phosphatase 1, regulatory subunit 9B	11		217124
Gene Ontology	actin binding | actin cytoskeleton organization and biogenesis | dendrite morphogenesis | protein binding
Human Homolog	PPP1R9B[protein phosphatase 1, regulatory subunit 9B, spinophilin]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 101 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAAAAATAAA (9) 32.6 0.0326 P8 Cb GC CCCTCTGTCA (4) 8.2 0.0082 P8 Cb GC GCGAGGAGTG (4) 3.3 0.0033 P8 Cb GC CCATCAATCA 1.6 0.0016 Cb medulloblastoma CAAAAATAAA (9) 69.4 0.0694 Cb medulloblastoma CCCTCTGTCA (4) 11.6 0.0116 Cb medulloblastoma CCATCAATCA 2.3 0.0023 P8 GC+1d culture CAAAAATAAA (9) 34.2 0.0342 P8 GC+1d culture GCGAGGAGTG (4) 9.1 0.0091 P8 GC+1d culture CCCTCTGTCA (4) 5.7 0.0057 P8 GC+1d culture CCATCAATCA 4.6 0.0046 P8 GC+1d culture GTTGGGGGAG (4) 1.1 0.0011 P8 GC+SHH+1d culture CAAAAATAAA (9) 65.6 0.0656 P8 GC+SHH+1d culture CCCTCTGTCA (4) 9.4 0.0094 P8 GC+SHH+1d culture GCGAGGAGTG (4) 9.4 0.0094 P8 GC+SHH+1d culture CCCTTTGTCA (3) 4.7 0.0047 P8 GC+SHH+1d culture CCATCAATCA 1.2 0.0012 P8 GC+SHH+1d culture CTGGGCTTAT (3) 1.2 0.0012 P8 GC+SHH+1d culture CTGTCACTGA (2) 1.2 0.0012 3T3 fibroblasts GCGAGGAGTG (4) 17.5 0.0175 3T3 fibroblasts CAAAAATAAA (9) 3.5 0.0035 3T3 fibroblasts CCCTCTGTCA (4) 3.5 0.0035 3T3 fibroblasts CCCTTTGTCA (3) 3.5 0.0035 E15 cortex CCCTTTGTCA (3) 14.8 0.0148 E15 cortex GCGAGGAGTG (4) 14.8 0.0148 E15 cortex CCCTCTGTCA (4) 9.9 0.0099 E15 cortex CAAAAATAAA (9) 4.9 0.0049 P1 cortex CAAAAATAAA (9) 36.4 0.0364 P1 cortex GCGAGGAGTG (4) 13.6 0.0136 P1 cortex CCCTCTGTCA (4) 9.1 0.0091 P1 cortex CCCTTTGTCA (3) 4.5 0.0045 P1 cortex CTGTCACTGA (2) 4.5 0.0045 Hypothalamus CAAAAATAAA (9) 67 0.067 Hypothalamus CCCTCTGTCA (4) 7.2 0.0072 Hypothalamus GCGAGGAGTG (4) 5.4 0.0054 Hypothalamus GTCTATTTAC (3) 5.4 0.0054 E12.5 retina CAAAAATAAA (9) 223.4 0.2234 E12.5 retina CCATCAATCA 3.8 0.0038 E12.5 retina GCGAGGAGTG (4) 3.8 0.0038 E12.5 retina GTCTATTTAC (3) 3.8 0.0038 E12.5 retina CCCTTTGTCA (3) 1.9 0.0019 E12.5 retina CTGGGCTTAT (3) 1.9 0.0019 E12.5 retina GTTGGGGGAG (4) 1.9 0.0019 E14.5 retina CAAAAATAAA (9) 153 0.153 E14.5 retina GCGAGGAGTG (4) 1.8 0.0018 E14.5 retina GTCTATTTAC (3) 1.8 0.0018 E16.5 retina CAAAAATAAA (9) 199.2 0.1992 E16.5 retina CCCTCTGTCA (4) 3.6 0.0036 E16.5 retina CCCTTTGTCA (3) 3.6 0.0036 E16.5 retina GCGAGGAGTG (4) 3.6 0.0036 E16.5 retina CCATCAATCA 1.8 0.0018 E18.5 retina CAAAAATAAA (9) 391.1 0.3911 E18.5 retina CCCTCTGTCA (4) 3.6 0.0036 E18.5 retina GCGAGGAGTG (4) 3.6 0.0036 E18.5 retina CCCTTTGTCA (3) 1.8 0.0018 E18.5 retina CTGTCACTGA (2) 1.8 0.0018 P0.5 retina CAAAAATAAA (9) 62.8 0.0628 P0.5 retina CCCTCTGTCA (4) 9.8 0.0098 P0.5 retina GCGAGGAGTG (4) 9.8 0.0098 P0.5 retina CCCTTTGTCA (3) 7.9 0.0079 P0.5 retina CTGGCTGGAA (8) 5.9 0.0059 P0.5 retina CCATCAATCA 2 0.002 P0.5 retina CTGTCACTGA (2) 2 0.002 P0.5 retina GTTGGGGGAG (4) 2 0.002 P2.5 retina CAAAAATAAA (9) 253.4 0.2534 P2.5 retina CCCTCTGTCA (4) 10.6 0.0106 P2.5 retina GCGAGGAGTG (4) 10.6 0.0106 P2.5 retina CTGGGCTTAT (3) 3.5 0.0035 P2.5 retina CCATCAATCA 1.8 0.0018 P2.5 retina CCCTTTGTCA (3) 1.8 0.0018 P4.5 retina CAAAAATAAA (9) 281.4 0.2814 P4.5 retina GCGAGGAGTG (4) 9.9 0.0099 P4.5 retina CCCTCTGTCA (4) 7.9 0.0079 P4.5 retina CCATCAATCA 4 0.004 P4.5 retina CCCTTTGTCA (3) 2 0.002 P6.5 retina CAAAAATAAA (9) 161.7 0.1617 P6.5 retina GCGAGGAGTG (4) 16.7 0.0167 P6.5 retina CCCTCTGTCA (4) 5 0.005 P6.5 retina CCATCAATCA 1.7 0.0017 P6.5 retina CCCTTTGTCA (3) 1.7 0.0017 P6.5 retina GTCTATTTAC (3) 1.7 0.0017 P6.5 retina GTTGGGGGAG (4) 1.7 0.0017 P10.5 crx- retina CAAAAATAAA (9) 96.6 0.0966 P10.5 crx- retina CCCTCTGTCA (4) 9.3 0.0093 P10.5 crx- retina CCATCAATCA 5.6 0.0056 P10.5 crx- retina GCGAGGAGTG (4) 5.6 0.0056 P10.5 crx+ retina CAAAAATAAA (9) 126.9 0.1269 P10.5 crx+ retina CCCTCTGTCA (4) 13.5 0.0135 P10.5 crx+ retina CCATCAATCA 5.8 0.0058 P10.5 crx+ retina CTGGGCTTAT (3) 1.9 0.0019 P10.5 crx+ retina GCGAGGAGTG (4) 1.9 0.0019 P10.5 crx+ retina GTTGGGGGAG (4) 1.9 0.0019 Adult retinal CAAAAATAAA (9) 81.5 0.0815 Adult retinal GCGAGGAGTG (4) 18.5 0.0185 Adult retinal CCCTCTGTCA (4) 5.6 0.0056 Adult retinal CTGTCACTGA (2) 1.9 0.0019 ONL CAAAAATAAA (9) 105.3 0.1053 ONL CCATCAATCA 3.8 0.0038 ONL CCCTCTGTCA (4) 3.8 0.0038 ONL GCGAGGAGTG (4) 3.8 0.0038 ONL CCCTTTGTCA (3) 1.9 0.0019