Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.229107
C530043G21Rik
RIKEN cDNA C530043G21 gene
1
215015
Gene Ontology
extracellular space
Human Homolog
FAM20B[family with sequence similarity 20, member B]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 61 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAGCTGAAGA (
4
)
1.6
0.0016
P8 Cb GC
AAGCTGAAGC
(
9
)
1.6
0.0016
Cb medulloblastoma
GCCAGCCTGG (
6
)
4.6
0.0046
Cb medulloblastoma
ACCCCATCTC
(
3
)
2.3
0.0023
Cb medulloblastoma
GATTCTCTGA
(
3
)
2.3
0.0023
Cb medulloblastoma
TAAGCAAAAC (
3
)
2.3
0.0023
P8 GC+1d culture
AAATAAAGCA (
11
)
1.1
0.0011
P8 GC+1d culture
TTTGTGTGTT (
4
)
1.1
0.0011
P8 GC+SHH+1d culture
AAATAAAGCA (
11
)
4.7
0.0047
P8 GC+SHH+1d culture
GATTCTCTGA
(
3
)
1.2
0.0012
P8 GC+SHH+1d culture
TAAGCAAAAC (
3
)
1.2
0.0012
P8 GC+SHH+1d culture
TTTTCTGCGG
1.2
0.0012
3T3 fibroblasts
GCCAGCCTGG (
6
)
21
0.021
3T3 fibroblasts
AAGCTGAAGC
(
9
)
3.5
0.0035
3T3 fibroblasts
GATTCTCTGA
(
3
)
3.5
0.0035
E15 cortex
GCCAGCCTGG (
6
)
9.9
0.0099
Hypothalamus
AAATAAAGCA (
11
)
1.8
0.0018
Hypothalamus
AAGCTGAAGC
(
9
)
1.8
0.0018
Hypothalamus
GCCAGCCTGG (
6
)
1.8
0.0018
Hypothalamus
TTTTCTGCGG
1.8
0.0018
E12.5 retina
TTTGTGTGTT (
4
)
3.8
0.0038
E12.5 retina
AAATAAAGCA (
11
)
1.9
0.0019
E12.5 retina
AAGCTGAAGA (
4
)
1.9
0.0019
E12.5 retina
AAGCTGAAGC
(
9
)
1.9
0.0019
E12.5 retina
GCCAGCCTGG (
6
)
1.9
0.0019
E14.5 retina
GCCAGCCTGG (
6
)
3.6
0.0036
E14.5 retina
ACCCCATCTC
(
3
)
1.8
0.0018
E14.5 retina
TAAGCAAAAC (
3
)
1.8
0.0018
E14.5 retina
TTTGTGTGTT (
4
)
1.8
0.0018
E16.5 retina
AAATAAAGCA (
11
)
3.6
0.0036
E16.5 retina
ACCCCATCTC
(
3
)
1.8
0.0018
E18.5 retina
AAATAAAGCA (
11
)
3.6
0.0036
E18.5 retina
ACCCCATCTC
(
3
)
3.6
0.0036
E18.5 retina
TAAGCAAAAC (
3
)
3.6
0.0036
E18.5 retina
TTTTCTGCGG
1.8
0.0018
P0.5 retina
GCCAGCCTGG (
6
)
5.9
0.0059
P0.5 retina
AAATAAAGCA (
11
)
2
0.002
P2.5 retina
ACCCCATCTC
(
3
)
5.3
0.0053
P2.5 retina
GCCAGCCTGG (
6
)
3.5
0.0035
P2.5 retina
AAATAAAGCA (
11
)
1.8
0.0018
P2.5 retina
TAAGCAAAAC (
3
)
1.8
0.0018
P4.5 retina
TAAGCAAAAC (
3
)
5.9
0.0059
P4.5 retina
GCCAGCCTGG (
6
)
4
0.004
P4.5 retina
TTTTCTGCGG
4
0.004
P4.5 retina
AAATAAAGCA (
11
)
2
0.002
P4.5 retina
AAGCTGAAGA (
4
)
2
0.002
P6.5 retina
ACCCCATCTC
(
3
)
3.3
0.0033
P6.5 retina
AAATAAAGCA (
11
)
1.7
0.0017
P6.5 retina
GATTCTCTGA
(
3
)
1.7
0.0017
P6.5 retina
GCCAGCCTGG (
6
)
1.7
0.0017
P10.5 crx- retina
AAATAAAGCA (
11
)
1.9
0.0019
P10.5 crx- retina
GCCAGCCTGG (
6
)
1.9
0.0019
P10.5 crx- retina
TTTGTGTGTT (
4
)
1.9
0.0019
P10.5 crx+ retina
TAAGCAAAAC (
3
)
3.8
0.0038
P10.5 crx+ retina
GCCAGCCTGG (
6
)
1.9
0.0019
Adult retinal
ACCCCATCTC
(
3
)
3.7
0.0037
Adult retinal
AAGCTGAAGC
(
9
)
1.9
0.0019
Adult retinal
GCCAGCCTGG (
6
)
1.9
0.0019
Adult retinal
TAAGCAAAAC (
3
)
1.9
0.0019
ONL
ACCCCATCTC
(
3
)
1.9
0.0019
ONL
GCCAGCCTGG (
6
)
1.9
0.0019
