Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.229128
1700013H19Rik
RIKEN cDNA 1700013H19 gene
8
71846
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 43 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGGTTGCTGG (
369
)
68.5
0.0685
P8 Cb GC
CTCTGATCCT
(
4
)
4.9
0.0049
P8 Cb GC
ACTTTTTTTT (
9
)
1.6
0.0016
Cb medulloblastoma
TGGTTGCTGG (
369
)
113.3
0.1133
Cb medulloblastoma
ACTTTTTTTT (
9
)
2.3
0.0023
Cb medulloblastoma
CTCTGATCCT
(
4
)
2.3
0.0023
P8 GC+1d culture
TGGTTGCTGG (
369
)
57.1
0.0571
P8 GC+1d culture
CCTCAAAGAG (
2
)
2.3
0.0023
P8 GC+1d culture
ACTTTTTTTT (
9
)
1.1
0.0011
P8 GC+SHH+1d culture
TGGTTGCTGG (
369
)
89
0.089
P8 GC+SHH+1d culture
CCTCAAAGAG (
2
)
1.2
0.0012
P8 GC+SHH+1d culture
CTGATATTGT
(
2
)
1.2
0.0012
3T3 fibroblasts
TGGTTGCTGG (
369
)
220.8
0.2208
E15 cortex
TGGTTGCTGG (
369
)
277.1
0.2771
E15 cortex
CCTCAAAGAG (
2
)
24.7
0.0247
P1 cortex
TGGTTGCTGG (
369
)
86.4
0.0864
P1 cortex
CCTCAAAGAG (
2
)
9.1
0.0091
P1 cortex
CTCTGATCCT
(
4
)
4.5
0.0045
Hypothalamus
TGGTTGCTGG (
369
)
349.6
0.3496
E12.5 retina
TGGTTGCTGG (
369
)
157.7
0.1577
E12.5 retina
CCTCAAAGAG (
2
)
7.5
0.0075
E12.5 retina
CTGATATTGT
(
2
)
1.9
0.0019
E14.5 retina
TGGTTGCTGG (
369
)
936.5
0.9365
E16.5 retina
TGGTTGCTGG (
369
)
767.9
0.7679
E16.5 retina
CTGATATTGT
(
2
)
1.8
0.0018
E18.5 retina
TGGTTGCTGG (
369
)
252.8
0.2528
E18.5 retina
CTCTGATCCT
(
4
)
1.8
0.0018
P0.5 retina
TGGTTGCTGG (
369
)
190.4
0.1904
P0.5 retina
CCTCAAAGAG (
2
)
5.9
0.0059
P0.5 retina
CTGATATTGT
(
2
)
3.9
0.0039
P2.5 retina
TGGTTGCTGG (
369
)
165.4
0.1654
P2.5 retina
CTGATATTGT
(
2
)
3.5
0.0035
P2.5 retina
CCTCAAAGAG (
2
)
1.8
0.0018
P4.5 retina
TGGTTGCTGG (
369
)
150.6
0.1506
P6.5 retina
TGGTTGCTGG (
369
)
156.7
0.1567
P10.5 crx- retina
TGGTTGCTGG (
369
)
280.5
0.2805
P10.5 crx+ retina
TGGTTGCTGG (
369
)
101.9
0.1019
P10.5 crx+ retina
CTGATATTGT
(
2
)
3.8
0.0038
P10.5 crx+ retina
CCTCAAAGAG (
2
)
1.9
0.0019
Adult retinal
TGGTTGCTGG (
369
)
214.8
0.2148
ONL
TGGTTGCTGG (
369
)
398.4
0.3984
ONL
ACTTTTTTTT (
9
)
1.9
0.0019
ONL
CCTCAAAGAG (
2
)
1.9
0.0019
