Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.229342	Acat2	acetyl-Coenzyme A acetyltransferase 2	17	17 7.55 cM	110460
Gene Ontology	acetyl-CoA C-acetyltransferase activity | acyltransferase activity | mitochondrion | transferase activity
Human Homolog	ACAT2[acetyl-Coenzyme A acetyltransferase 2 (acetoacetyl Coenzyme A thiolase)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 78 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTATCGTCT (2) 4.9 0.0049 P8 Cb GC GCTTTAATTA (7) 3.3 0.0033 P8 Cb GC GGAAACCACG (3) 3.3 0.0033 P8 Cb GC CCTTTAATTC (36) 1.6 0.0016 P8 Cb GC GACCAAATCA (5) 1.6 0.0016 P8 Cb GC GGGATTCGGC 1.6 0.0016 Cb medulloblastoma CTCAGAAAGC (5) 11.6 0.0116 Cb medulloblastoma CCTTTAATTC (36) 4.6 0.0046 Cb medulloblastoma CACATTGGTT (3) 2.3 0.0023 Cb medulloblastoma TTTATCGTCT (2) 2.3 0.0023 P8 GC+1d culture GGAAACCACG (3) 18.3 0.0183 P8 GC+1d culture CTCAGAAAGC (5) 4.6 0.0046 P8 GC+1d culture GGGATTCGGC 3.4 0.0034 P8 GC+1d culture ACTCTCCAGT (2) 1.1 0.0011 P8 GC+1d culture CACATTGGTT (3) 1.1 0.0011 P8 GC+1d culture GAGCTGCAGA (6) 1.1 0.0011 P8 GC+SHH+1d culture GGAAACCACG (3) 17.6 0.0176 P8 GC+SHH+1d culture CCTTTAATTC (36) 7 0.007 P8 GC+SHH+1d culture GGGATTCGGC 7 0.007 P8 GC+SHH+1d culture CTCAGAAAGC (5) 2.3 0.0023 P8 GC+SHH+1d culture GACCAAATCA (5) 2.3 0.0023 P8 GC+SHH+1d culture TTTATCGTCT (2) 2.3 0.0023 P8 GC+SHH+1d culture CACATTGGTT (3) 1.2 0.0012 P8 GC+SHH+1d culture GCTTTAATTA (7) 1.2 0.0012 3T3 fibroblasts GGAAACCACG (3) 21 0.021 3T3 fibroblasts GGGATTCGGC 14 0.014 3T3 fibroblasts CCTTTAATTC (36) 7 0.007 E15 cortex GGAAACCACG (3) 24.7 0.0247 E15 cortex GGGATTCGGC 9.9 0.0099 E15 cortex ACTCTCCAGT (2) 4.9 0.0049 E15 cortex CTCAGAAAGC (5) 4.9 0.0049 P1 cortex CCTTTAATTC (36) 13.6 0.0136 P1 cortex GAGCTGCAGA (6) 9.1 0.0091 P1 cortex GGAAACCACG (3) 9.1 0.0091 P1 cortex GGGATTCGGC 9.1 0.0091 Hypothalamus CTCAGAAAGC (5) 5.4 0.0054 Hypothalamus GGAAACCACG (3) 1.8 0.0018 Hypothalamus TTTATCGTCT (2) 1.8 0.0018 E12.5 retina GGAAACCACG (3) 7.5 0.0075 E12.5 retina CCTTTAATTC (36) 3.8 0.0038 E12.5 retina ACTCTCCAGT (2) 1.9 0.0019 E12.5 retina GGGATTCGGC 1.9 0.0019 E14.5 retina CCTTTAATTC (36) 7.3 0.0073 E14.5 retina GGAAACCACG (3) 5.5 0.0055 E16.5 retina GGAAACCACG (3) 14.5 0.0145 E16.5 retina CCTTTAATTC (36) 3.6 0.0036 E16.5 retina GAGCAGATCA (4) 1.8 0.0018 E16.5 retina GCTTTAATTA (7) 1.8 0.0018 E16.5 retina GGGATTCGGC 1.8 0.0018 E18.5 retina GGAAACCACG (3) 5.5 0.0055 E18.5 retina CCTTTAATTC (36) 1.8 0.0018 P0.5 retina GGAAACCACG (3) 15.7 0.0157 P0.5 retina CCTTTAATTC (36) 5.9 0.0059 P0.5 retina CTCAGAAAGC (5) 2 0.002 P0.5 retina GGGATTCGGC 2 0.002 P2.5 retina CTCAGAAAGC (5) 5.3 0.0053 P2.5 retina CCTTTAATTC (36) 1.8 0.0018 P2.5 retina GACCAAATCA (5) 1.8 0.0018 P4.5 retina GGAAACCACG (3) 5.9 0.0059 P4.5 retina CCTTTAATTC (36) 4 0.004 P4.5 retina GGGATTCGGC 4 0.004 P4.5 retina CACATTGGTT (3) 2 0.002 P4.5 retina CTCAGAAAGC (5) 2 0.002 P6.5 retina CTCAGAAAGC (5) 6.7 0.0067 P6.5 retina GGAAACCACG (3) 6.7 0.0067 P6.5 retina CCTTTAATTC (36) 5 0.005 P10.5 crx- retina GGAAACCACG (3) 11.1 0.0111 P10.5 crx- retina CCTTTAATTC (36) 1.9 0.0019 P10.5 crx+ retina GGAAACCACG (3) 11.5 0.0115 P10.5 crx+ retina CTCAGAAAGC (5) 7.7 0.0077 P10.5 crx+ retina GAGCTGCAGA (6) 1.9 0.0019 P10.5 crx+ retina GGGATTCGGC 1.9 0.0019 Adult retinal CTCAGAAAGC (5) 3.7 0.0037 Adult retinal GGAAACCACG (3) 3.7 0.0037 Adult retinal CCTTTAATTC (36) 1.9 0.0019 ONL GGAAACCACG (3) 11.5 0.0115 ONL GAAGCTGAAA (4) 5.7 0.0057 ONL CCTTTAATTC (36) 3.8 0.0038