Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.232523	Car6	carbonic anhydrase 6	4		12353
Gene Ontology	carbonate dehydratase activity | extracellular space | lyase activity | one-carbon compound metabolism | zinc ion binding
Human Homolog	CA6[carbonic anhydrase VI]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 83 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCCAAGGTGG (5) 14.7 0.0147 P8 Cb GC TACAACTTGG (4) 4.9 0.0049 P8 Cb GC CAAAATGGTT (3) 3.3 0.0033 P8 Cb GC TGCGAAGGGA (6) 3.3 0.0033 P8 Cb GC AAGGAGAGTT (4) 1.6 0.0016 P8 Cb GC GAAAAAGAAT (8) 1.6 0.0016 P8 Cb GC GCAGACAGGG (5) 1.6 0.0016 Cb medulloblastoma GAAAAAGAAT (8) 4.6 0.0046 Cb medulloblastoma AAGGAGAGTT (4) 2.3 0.0023 Cb medulloblastoma GCAGACAGGG (5) 2.3 0.0023 Cb medulloblastoma TACAACTTGG (4) 2.3 0.0023 Cb medulloblastoma TACCTTGAAA 2.3 0.0023 P8 GC+1d culture GCAGACAGGG (5) 5.7 0.0057 P8 GC+1d culture GCCAAGGTGG (5) 5.7 0.0057 P8 GC+1d culture TGCGAAGGGA (6) 2.3 0.0023 P8 GC+1d culture GGAGGGAGTT (3) 1.1 0.0011 P8 GC+1d culture TACAACTTGG (4) 1.1 0.0011 P8 GC+1d culture TACCTTGAAA 1.1 0.0011 P8 GC+SHH+1d culture GCCAAGGTGG (5) 9.4 0.0094 P8 GC+SHH+1d culture TACAACTTGG (4) 8.2 0.0082 P8 GC+SHH+1d culture CTGAAGGAGA (3) 1.2 0.0012 P8 GC+SHH+1d culture GAAAAAGAAT (8) 1.2 0.0012 P8 GC+SHH+1d culture GCGGCTCACT 1.2 0.0012 3T3 fibroblasts AAGGAGAGTT (4) 14 0.014 3T3 fibroblasts GCCAAGGTGG (5) 3.5 0.0035 E15 cortex GCCAAGGTGG (5) 19.8 0.0198 E15 cortex ACACACACAA (3) 4.9 0.0049 E15 cortex GCAGACAGGG (5) 4.9 0.0049 E15 cortex TGTCAAACTA (2) 4.9 0.0049 P1 cortex AAGGAGAGTT (4) 4.5 0.0045 P1 cortex GCCAAGGTGG (5) 4.5 0.0045 P1 cortex TGTCAAACTA (2) 4.5 0.0045 Hypothalamus TACCTTGAAA 5.4 0.0054 Hypothalamus CTGAAGGAGA (3) 1.8 0.0018 Hypothalamus GCAGACAGGG (5) 1.8 0.0018 E12.5 retina GCCAAGGTGG (5) 13.1 0.0131 E12.5 retina ACACACACAA (3) 1.9 0.0019 E12.5 retina GAAAAAGAAT (8) 1.9 0.0019 E12.5 retina TGCGAAGGGA (6) 1.9 0.0019 E14.5 retina GCCAAGGTGG (5) 5.5 0.0055 E14.5 retina TGCGAAGGGA (6) 1.8 0.0018 E14.5 retina TGTCAAACTA (2) 1.8 0.0018 E16.5 retina GCCAAGGTGG (5) 9.1 0.0091 E16.5 retina CTGAAGGAGA (3) 1.8 0.0018 E16.5 retina GCGGCTCACT 1.8 0.0018 E16.5 retina GGGAATCTCT (4) 1.8 0.0018 E16.5 retina TACCTTGAAA 1.8 0.0018 E16.5 retina TGTCAAACTA (2) 1.8 0.0018 E18.5 retina ACACACACAA (3) 3.6 0.0036 E18.5 retina GCCAAGGTGG (5) 3.6 0.0036 E18.5 retina AAGGAGAGTT (4) 1.8 0.0018 E18.5 retina TACAACTTGG (4) 1.8 0.0018 E18.5 retina TGCGAAGGGA (6) 1.8 0.0018 P0.5 retina GCCAAGGTGG (5) 15.7 0.0157 P0.5 retina TACAACTTGG (4) 5.9 0.0059 P0.5 retina AAGGAGAGTT (4) 2 0.002 P0.5 retina TGCGAAGGGA (6) 2 0.002 P2.5 retina GCCAAGGTGG (5) 7 0.007 P2.5 retina AAGGAGAGTT (4) 3.5 0.0035 P2.5 retina GCGGCTCACT 1.8 0.0018 P2.5 retina TACAACTTGG (4) 1.8 0.0018 P2.5 retina TACCTTGAAA 1.8 0.0018 P2.5 retina TGTCAAACTA (2) 1.8 0.0018 P4.5 retina GCCAAGGTGG (5) 2 0.002 P4.5 retina GCGGCTCACT 2 0.002 P6.5 retina AAGGAGAGTT (4) 1.7 0.0017 P6.5 retina ACACACACAA (3) 1.7 0.0017 P6.5 retina CAAAATGGTT (3) 1.7 0.0017 P6.5 retina GCCAAGGTGG (5) 1.7 0.0017 P6.5 retina GGGAATCTCT (4) 1.7 0.0017 P10.5 crx- retina TACAACTTGG (4) 1.9 0.0019 P10.5 crx- retina TACCTTGAAA 1.9 0.0019 P10.5 crx- retina TGTCAAACTA (2) 1.9 0.0019 P10.5 crx+ retina TACAACTTGG (4) 3.8 0.0038 Adult retinal ACACACACAA (3) 3.7 0.0037 Adult retinal GCAGACAGGG (5) 3.7 0.0037 Adult retinal TACCTTGAAA 3.7 0.0037 Adult retinal AAGGAGAGTT (4) 1.9 0.0019 Adult retinal CTGAAGGAGA (3) 1.9 0.0019 ONL TACAACTTGG (4) 11.5 0.0115 ONL AAGGAGAGTT (4) 1.9 0.0019 ONL CTGAAGGAGA (3) 1.9 0.0019 ONL GGAGGGAGTT (3) 1.9 0.0019