Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.23267	D19Ertd756e	DNA segment, Chr 19, ERATO Doi 756, expressed	19		52034
Mm.23267	Smc5l1	SMC5 structural maintenance of chromosomes 5-like 1 (yeast)	19		226026
Human Homolog	SMC5L1[SMC5 structural maintenance of chromosomes 5-like 1 (yeast)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 45 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTCAAAAAAA (25) 13.1 0.0131 P8 Cb GC AAAGGAGAGA (6) 1.6 0.0016 P8 Cb GC AGTTTATGTC (4) 1.6 0.0016 P8 Cb GC GTAAACAAAA (4) 1.6 0.0016 Cb medulloblastoma TTCAAAAAAA (25) 37 0.037 Cb medulloblastoma GTAAACAAAA (4) 6.9 0.0069 Cb medulloblastoma CTAACAAGCT (2) 2.3 0.0023 P8 GC+1d culture TTCAAAAAAA (25) 12.6 0.0126 P8 GC+1d culture GTAAACAAAA (4) 1.1 0.0011 P8 GC+SHH+1d culture TTCAAAAAAA (25) 29.3 0.0293 P8 GC+SHH+1d culture CTAACAAGCT (2) 1.2 0.0012 3T3 fibroblasts CCTTTAGTCT (7) 3.5 0.0035 E15 cortex TTCAAAAAAA (25) 29.7 0.0297 E15 cortex CCTTTAGTCT (7) 4.9 0.0049 P1 cortex TTCAAAAAAA (25) 4.5 0.0045 Hypothalamus TTCAAAAAAA (25) 7.2 0.0072 Hypothalamus CCTTTAGTCT (7) 1.8 0.0018 Hypothalamus CGCGCGCACA (7) 1.8 0.0018 E12.5 retina TTCAAAAAAA (25) 9.4 0.0094 E12.5 retina CGCGCGCACA (7) 1.9 0.0019 E14.5 retina TTCAAAAAAA (25) 20 0.02 E14.5 retina CCTTTAGTCT (7) 1.8 0.0018 E14.5 retina CGCGCGCACA (7) 1.8 0.0018 E16.5 retina TTCAAAAAAA (25) 9.1 0.0091 E16.5 retina AAAGGAGAGA (6) 1.8 0.0018 E18.5 retina TTCAAAAAAA (25) 36.4 0.0364 P0.5 retina TTCAAAAAAA (25) 9.8 0.0098 P0.5 retina CCTTTAGTCT (7) 5.9 0.0059 P0.5 retina AAAGGAGAGA (6) 2 0.002 P0.5 retina CTAACAAGCT (2) 2 0.002 P2.5 retina TTCAAAAAAA (25) 7 0.007 P2.5 retina CTAACAAGCT (2) 1.8 0.0018 P4.5 retina TTCAAAAAAA (25) 31.7 0.0317 P4.5 retina CTAACAAGCT (2) 2 0.002 P6.5 retina TTCAAAAAAA (25) 8.3 0.0083 P6.5 retina CGCGCGCACA (7) 1.7 0.0017 P6.5 retina CTAACAAGCT (2) 1.7 0.0017 P10.5 crx- retina TTCAAAAAAA (25) 5.6 0.0056 P10.5 crx+ retina TTCAAAAAAA (25) 9.6 0.0096 Adult retinal CGCGCGCACA (7) 5.6 0.0056 Adult retinal TTCAAAAAAA (25) 5.6 0.0056 ONL TTCAAAAAAA (25) 3.8 0.0038 ONL CCTTTAGTCT (7) 1.9 0.0019 ONL CGCGCGCACA (7) 1.9 0.0019 ONL GTAAACAAAA (4) 1.9 0.0019