Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.233181	4933407C03Rik	RIKEN cDNA 4933407C03 gene	8		74440
Human Homolog	CMIP[c-Maf-inducing protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 152 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCAAAAAAAA (50) 14.7 0.0147 P8 Cb GC GGCTCTGTTA (4) 4.9 0.0049 P8 Cb GC TCTGAGACAG (3) 4.9 0.0049 P8 Cb GC AGACAAAAAA (18) 3.3 0.0033 P8 Cb GC AAGAGTCTTT (3) 1.6 0.0016 P8 Cb GC AGACACAAAT (3) 1.6 0.0016 P8 Cb GC GCGTGTAGTA (2) 1.6 0.0016 P8 Cb GC TTATGGTGAC (3) 1.6 0.0016 Cb medulloblastoma GCAAAAAAAA (50) 60.1 0.0601 Cb medulloblastoma AGACAAAAAA (18) 13.9 0.0139 Cb medulloblastoma AGACACAAAT (3) 4.6 0.0046 Cb medulloblastoma GGCTCTGTTA (4) 4.6 0.0046 P8 GC+1d culture GCAAAAAAAA (50) 12.6 0.0126 P8 GC+1d culture AGACAAAAAA (18) 6.8 0.0068 P8 GC+1d culture CTTCGGTTGT 5.7 0.0057 P8 GC+1d culture GGCTCTGTTA (4) 4.6 0.0046 P8 GC+1d culture TCTGAGACAG (3) 3.4 0.0034 P8 GC+1d culture AAGAGTCCTT (2) 1.1 0.0011 P8 GC+1d culture AGACACAAAT (3) 1.1 0.0011 P8 GC+1d culture GAAATTATAC 1.1 0.0011 P8 GC+1d culture GCGTGTAGTA (2) 1.1 0.0011 P8 GC+1d culture TTATGGTGAC (3) 1.1 0.0011 P8 GC+SHH+1d culture GCAAAAAAAA (50) 29.3 0.0293 P8 GC+SHH+1d culture AGACAAAAAA (18) 7 0.007 P8 GC+SHH+1d culture AGACACAAAT (3) 5.9 0.0059 P8 GC+SHH+1d culture GGCTCTGTTA (4) 4.7 0.0047 P8 GC+SHH+1d culture AAGAGTCTTT (3) 1.2 0.0012 P8 GC+SHH+1d culture CTTCGGTTGT 1.2 0.0012 P8 GC+SHH+1d culture GAAATTATAC 1.2 0.0012 P8 GC+SHH+1d culture GTCTCCATCG (2) 1.2 0.0012 P8 GC+SHH+1d culture GTCTCTTGGG (3) 1.2 0.0012 P8 GC+SHH+1d culture TATGAACAGC 1.2 0.0012 P8 GC+SHH+1d culture TCTGAGACAG (3) 1.2 0.0012 3T3 fibroblasts AGACACAAAT (3) 3.5 0.0035 3T3 fibroblasts GCAAAAAAAA (50) 3.5 0.0035 E15 cortex GCAAAAAAAA (50) 9.9 0.0099 E15 cortex GGCTCTGTTA (4) 9.9 0.0099 E15 cortex CTTCGGTTGT 4.9 0.0049 E15 cortex TCTGAGACAG (3) 4.9 0.0049 P1 cortex CTTCGGTTGT 31.8 0.0318 P1 cortex AAGAGTCTTT (3) 18.2 0.0182 P1 cortex AGACAAAAAA (18) 18.2 0.0182 P1 cortex GTCTCTTGGG (3) 9.1 0.0091 P1 cortex AAGAGTCCTT (2) 4.5 0.0045 P1 cortex GCAAAAAAAA (50) 4.5 0.0045 P1 cortex GTCTCCATCG (2) 4.5 0.0045 P1 cortex TCTGAGACAG (3) 4.5 0.0045 Hypothalamus GCAAAAAAAA (50) 19.9 0.0199 Hypothalamus AGACAAAAAA (18) 10.9 0.0109 Hypothalamus AAGAGTCTTT (3) 3.6 0.0036 Hypothalamus AGACACAAAT (3) 3.6 0.0036 Hypothalamus GCGTGTAGTA (2) 3.6 0.0036 Hypothalamus CCACCCCCGC 1.8 0.0018 Hypothalamus GAAATTATAC 1.8 0.0018 Hypothalamus GGCTCTGTTA (4) 1.8 0.0018 Hypothalamus TATGAACAGC 1.8 0.0018 E12.5 retina GGCTCTGTTA (4) 11.3 0.0113 E12.5 retina AGACAAAAAA (18) 9.4 0.0094 E12.5 retina GCAAAAAAAA (50) 9.4 0.0094 E12.5 retina AAGAGTCTTT (3) 1.9 0.0019 E12.5 retina CTTCGGTTGT 1.9 0.0019 E12.5 retina GAAATTATAC 1.9 0.0019 E12.5 retina GCGTGTAGTA (2) 1.9 0.0019 E14.5 retina AGACACAAAT (3) 18.2 0.0182 E14.5 retina GCAAAAAAAA (50) 12.8 0.0128 E14.5 retina AGACAAAAAA (18) 5.5 0.0055 E14.5 retina CTTCGGTTGT 3.6 0.0036 E14.5 retina GGCTCTGTTA (4) 3.6 0.0036 E14.5 retina TCTGAGACAG (3) 3.6 0.0036 E14.5 retina AAGAGTCTTT (3) 1.8 0.0018 E14.5 retina CCACCCCCGC 1.8 0.0018 E14.5 retina GAAATTATAC 1.8 0.0018 E14.5 retina GCGTGTAGTA (2) 1.8 0.0018 E14.5 retina GTCTCCATCG (2) 1.8 0.0018 E14.5 retina TTATGGTGAC (3) 1.8 0.0018 E16.5 retina AGACACAAAT (3) 10.9 0.0109 E16.5 retina GCAAAAAAAA (50) 10.9 0.0109 E16.5 retina GGCTCTGTTA (4) 9.1 0.0091 E16.5 retina AAGAGTCTTT (3) 3.6 0.0036 E16.5 retina GAGGTGAGGG (2) 3.6 0.0036 E16.5 retina AGACAAAAAA (18) 1.8 0.0018 E16.5 retina GTCTCCATCG (2) 1.8 0.0018 E16.5 retina GTCTCTTGGG (3) 1.8 0.0018 E16.5 retina TATGAACAGC 1.8 0.0018 E18.5 retina GCAAAAAAAA (50) 25.5 0.0255 E18.5 retina AGACAAAAAA (18) 9.1 0.0091 E18.5 retina AGACACAAAT (3) 3.6 0.0036 E18.5 retina AAGAGTCTTT (3) 1.8 0.0018 E18.5 retina CTTCGGTTGT 1.8 0.0018 E18.5 retina GGCTCTGTTA (4) 1.8 0.0018 E18.5 retina GTCTCCATCG (2) 1.8 0.0018 E18.5 retina TCTGAGACAG (3) 1.8 0.0018 P0.5 retina GCAAAAAAAA (50) 17.7 0.0177 P0.5 retina AGACACAAAT (3) 7.9 0.0079 P0.5 retina AAGAGTCTTT (3) 5.9 0.0059 P0.5 retina CTTCGGTTGT 5.9 0.0059 P0.5 retina GGCTCTGTTA (4) 3.9 0.0039 P0.5 retina AGACAAAAAA (18) 2 0.002 P0.5 retina GCGTGTAGTA (2) 2 0.002 P0.5 retina TCTGAGACAG (3) 2 0.002 P2.5 retina GCAAAAAAAA (50) 22.9 0.0229 P2.5 retina AAGAGTCTTT (3) 7 0.007 P2.5 retina AGACAAAAAA (18) 7 0.007 P2.5 retina CTTCGGTTGT 5.3 0.0053 P2.5 retina GGCTCTGTTA (4) 3.5 0.0035 P2.5 retina AGACACAAAT (3) 1.8 0.0018 P2.5 retina CCACCCCCGC 1.8 0.0018 P2.5 retina GCGTGTAGTA (2) 1.8 0.0018 P2.5 retina TCTGAGACAG (3) 1.8 0.0018 P4.5 retina GCAAAAAAAA (50) 25.8 0.0258 P4.5 retina AGACAAAAAA (18) 7.9 0.0079 P4.5 retina CTTCGGTTGT 7.9 0.0079 P4.5 retina GGCTCTGTTA (4) 5.9 0.0059 P4.5 retina AAGAGTCTTT (3) 4 0.004 P4.5 retina AGACACAAAT (3) 2 0.002 P4.5 retina CCACCCCCGC 2 0.002 P4.5 retina GAGGTGAGGG (2) 2 0.002 P6.5 retina AGACAAAAAA (18) 15 0.015 P6.5 retina GCAAAAAAAA (50) 11.7 0.0117 P6.5 retina GGCTCTGTTA (4) 8.3 0.0083 P6.5 retina GAAATTATAC 6.7 0.0067 P6.5 retina CTTCGGTTGT 5 0.005 P6.5 retina AAGAGTCTTT (3) 3.3 0.0033 P6.5 retina GTCTCCATCG (2) 3.3 0.0033 P6.5 retina AGACACAAAT (3) 1.7 0.0017 P6.5 retina GCGTGTAGTA (2) 1.7 0.0017 P10.5 crx- retina AGACACAAAT (3) 7.4 0.0074 P10.5 crx- retina GCAAAAAAAA (50) 5.6 0.0056 P10.5 crx- retina GGCTCTGTTA (4) 5.6 0.0056 P10.5 crx- retina AGACAAAAAA (18) 3.7 0.0037 P10.5 crx- retina TCTGAGACAG (3) 3.7 0.0037 P10.5 crx- retina CTTCGGTTGT 1.9 0.0019 P10.5 crx+ retina AGACAAAAAA (18) 11.5 0.0115 P10.5 crx+ retina AAGAGTCCTT (2) 1.9 0.0019 P10.5 crx+ retina AGACACAAAT (3) 1.9 0.0019 P10.5 crx+ retina CCACCCCCGC 1.9 0.0019 P10.5 crx+ retina CTTCGGTTGT 1.9 0.0019 P10.5 crx+ retina GCAAAAAAAA (50) 1.9 0.0019 P10.5 crx+ retina GGCTCTGTTA (4) 1.9 0.0019 P10.5 crx+ retina GTCTCCATCG (2) 1.9 0.0019 Adult retinal AGACAAAAAA (18) 38.9 0.0389 Adult retinal GCAAAAAAAA (50) 11.1 0.0111 Adult retinal TCTGAGACAG (3) 3.7 0.0037 Adult retinal AAGAGTCTTT (3) 1.9 0.0019 Adult retinal CCACCCCCGC 1.9 0.0019 Adult retinal CTTCGGTTGT 1.9 0.0019 Adult retinal GCCACACAGG (7) 1.9 0.0019 Adult retinal TTATGGTGAC (3) 1.9 0.0019 ONL AGACAAAAAA (18) 57.5 0.0575 ONL GCCACACAGG (7) 3.8 0.0038 ONL GCAAAAAAAA (50) 1.9 0.0019 ONL GGCTCTGTTA (4) 1.9 0.0019