Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.234179
1700020N18Rik
RIKEN cDNA 1700020N18 gene
1
67086
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 58 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GGAGGGTTGG (
2
)
13.1
0.0131
P8 Cb GC
GTTGTAAATA
(
2
)
8.2
0.0082
P8 Cb GC
GTGAAAAAAA (
22
)
4.9
0.0049
Cb medulloblastoma
GTGAAAAAAA (
22
)
43.9
0.0439
Cb medulloblastoma
GGAGGGTTGG (
2
)
18.5
0.0185
P8 GC+1d culture
GGAGGGTTGG (
2
)
28.5
0.0285
P8 GC+1d culture
GTGAAAAAAA (
22
)
6.8
0.0068
P8 GC+1d culture
GTTGTAAATA
(
2
)
4.6
0.0046
P8 GC+SHH+1d culture
GGAGGGTTGG (
2
)
19.9
0.0199
P8 GC+SHH+1d culture
GTGAAAAAAA (
22
)
10.5
0.0105
P8 GC+SHH+1d culture
GTTGTAAATA
(
2
)
8.2
0.0082
P8 GC+SHH+1d culture
CAACAGGCTG
1.2
0.0012
E15 cortex
GGAGGGTTGG (
2
)
24.7
0.0247
P1 cortex
GGAGGGTTGG (
2
)
22.7
0.0227
Hypothalamus
GGAGGGTTGG (
2
)
25.4
0.0254
Hypothalamus
GTGAAAAAAA (
22
)
18.1
0.0181
Hypothalamus
CAACAGGCTG
1.8
0.0018
Hypothalamus
CAGCTTCATA
1.8
0.0018
E12.5 retina
GTGAAAAAAA (
22
)
11.3
0.0113
E12.5 retina
GTTGTAAATA
(
2
)
9.4
0.0094
E12.5 retina
GGAGGGTTGG (
2
)
3.8
0.0038
E12.5 retina
CAGCTTCATA
1.9
0.0019
E14.5 retina
GTTGTAAATA
(
2
)
14.6
0.0146
E14.5 retina
GTGAAAAAAA (
22
)
12.8
0.0128
E14.5 retina
GGAGGGTTGG (
2
)
5.5
0.0055
E16.5 retina
GTTGTAAATA
(
2
)
21.7
0.0217
E16.5 retina
GGAGGGTTGG (
2
)
14.5
0.0145
E16.5 retina
GTGAAAAAAA (
22
)
5.4
0.0054
E16.5 retina
CAACAGGCTG
3.6
0.0036
E16.5 retina
CAGCTTCATA
3.6
0.0036
E18.5 retina
GTGAAAAAAA (
22
)
20
0.02
E18.5 retina
GTTGTAAATA
(
2
)
20
0.02
E18.5 retina
GGAGGGTTGG (
2
)
5.5
0.0055
P0.5 retina
GGAGGGTTGG (
2
)
15.7
0.0157
P0.5 retina
GTTGTAAATA
(
2
)
11.8
0.0118
P0.5 retina
GTGAAAAAAA (
22
)
7.9
0.0079
P0.5 retina
CAGCTTCATA
2
0.002
P2.5 retina
GTTGTAAATA
(
2
)
17.6
0.0176
P2.5 retina
GTGAAAAAAA (
22
)
10.6
0.0106
P2.5 retina
GGAGGGTTGG (
2
)
8.8
0.0088
P2.5 retina
CTTCTCGGGT
(
3
)
3.5
0.0035
P4.5 retina
GTGAAAAAAA (
22
)
23.8
0.0238
P4.5 retina
GTTGTAAATA
(
2
)
15.9
0.0159
P4.5 retina
GGAGGGTTGG (
2
)
4
0.004
P6.5 retina
GTTGTAAATA
(
2
)
13.3
0.0133
P6.5 retina
GGAGGGTTGG (
2
)
8.3
0.0083
P6.5 retina
GTGAAAAAAA (
22
)
5
0.005
P10.5 crx- retina
GGAGGGTTGG (
2
)
31.6
0.0316
P10.5 crx- retina
GTTGTAAATA
(
2
)
5.6
0.0056
P10.5 crx- retina
GTGAAAAAAA (
22
)
3.7
0.0037
P10.5 crx+ retina
GGAGGGTTGG (
2
)
25
0.025
P10.5 crx+ retina
GTTGTAAATA
(
2
)
7.7
0.0077
P10.5 crx+ retina
GTGAAAAAAA (
22
)
5.8
0.0058
P10.5 crx+ retina
CTTCTCGGGT
(
3
)
1.9
0.0019
Adult retinal
GGAGGGTTGG (
2
)
11.1
0.0111
Adult retinal
GTGAAAAAAA (
22
)
3.7
0.0037
ONL
GTTGTAAATA
(
2
)
7.7
0.0077
ONL
GTGAAAAAAA (
22
)
5.7
0.0057
