Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.234233
Pgbd5
piggyBac transposable element derived 5
8
209966
Mm.234233
2900019M05Rik
RIKEN cDNA 2900019M05 gene
8
67257
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 43 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TTTTTTTTTT (
433
)
4.9
0.0049
Cb medulloblastoma
AGATCAGCTT
(
2
)
2.3
0.0023
Cb medulloblastoma
TTTTTTTTTT (
433
)
2.3
0.0023
P8 GC+1d culture
TTTTTTTTTT (
433
)
13.7
0.0137
P8 GC+1d culture
CAGGGAGCTG
(
4
)
1.1
0.0011
P8 GC+1d culture
GAGCCTGAGC
(
2
)
1.1
0.0011
P8 GC+1d culture
GCGAGGACAG (
6
)
1.1
0.0011
P8 GC+SHH+1d culture
TTTTTTTTTT (
433
)
5.9
0.0059
P8 GC+SHH+1d culture
CAGGGAGCTG
(
4
)
2.3
0.0023
P8 GC+SHH+1d culture
AGATCAGCTT
(
2
)
1.2
0.0012
E15 cortex
TTTTTTTTTT (
433
)
4.9
0.0049
P1 cortex
GCGAGGACAG (
6
)
4.5
0.0045
P1 cortex
TTTTTTTTTT (
433
)
4.5
0.0045
Hypothalamus
TTTTTTTTTT (
433
)
7.2
0.0072
Hypothalamus
AGATCAGCTT
(
2
)
1.8
0.0018
Hypothalamus
CAGGGAGCTG
(
4
)
1.8
0.0018
Hypothalamus
GAGCCTGAGC
(
2
)
1.8
0.0018
E12.5 retina
TTTTTTTTTT (
433
)
7.5
0.0075
E12.5 retina
GCGAGGACAG (
6
)
3.8
0.0038
E14.5 retina
TTTTTTTTTT (
433
)
23.7
0.0237
E16.5 retina
TTTTTTTTTT (
433
)
5.4
0.0054
E16.5 retina
GCGAGGACAG (
6
)
1.8
0.0018
E18.5 retina
TTTTTTTTTT (
433
)
10.9
0.0109
E18.5 retina
GCGAGGACAG (
6
)
3.6
0.0036
E18.5 retina
CAGGGAGCTG
(
4
)
1.8
0.0018
P0.5 retina
TTTTTTTTTT (
433
)
9.8
0.0098
P0.5 retina
GCGAGGACAG (
6
)
2
0.002
P2.5 retina
TTTTTTTTTT (
433
)
7
0.007
P2.5 retina
GAGCCTGAGC
(
2
)
1.8
0.0018
P2.5 retina
GCGAGGACAG (
6
)
1.8
0.0018
P4.5 retina
TTTTTTTTTT (
433
)
9.9
0.0099
P4.5 retina
GCGAGGACAG (
6
)
4
0.004
P6.5 retina
TTTTTTTTTT (
433
)
8.3
0.0083
P6.5 retina
GCGAGGACAG (
6
)
3.3
0.0033
P10.5 crx- retina
GAGCCTGAGC
(
2
)
1.9
0.0019
P10.5 crx- retina
GCGAGGACAG (
6
)
1.9
0.0019
P10.5 crx+ retina
TTTTTTTTTT (
433
)
3.8
0.0038
P10.5 crx+ retina
AGATCAGCTT
(
2
)
1.9
0.0019
P10.5 crx+ retina
CAGGGAGCTG
(
4
)
1.9
0.0019
Adult retinal
TTTTTTTTTT (
433
)
7.4
0.0074
Adult retinal
GAGCCTGAGC
(
2
)
5.6
0.0056
ONL
TTTTTTTTTT (
433
)
3.8
0.0038
ONL
CAGGGAGCTG
(
4
)
1.9
0.0019
