Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.234368
Klhdc2
kelch domain containing 2
12
12 30.0 cM
69554
Human Homolog
KLHDC2[kelch domain containing 2]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 123 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGAATGGCCT
(
3
)
19.6
0.0196
P8 Cb GC
GTATTTAACA (
3
)
17.9
0.0179
P8 Cb GC
CCCTGAGGGT (
4
)
1.6
0.0016
P8 Cb GC
CCCTGTGCAA
1.6
0.0016
P8 Cb GC
CCTTTAATTC (
36
)
1.6
0.0016
Cb medulloblastoma
ATGTAACGAC
(
3
)
9.2
0.0092
Cb medulloblastoma
GTATTTAACA (
3
)
9.2
0.0092
Cb medulloblastoma
TAAGTAAAAA (
4
)
6.9
0.0069
Cb medulloblastoma
CCTTTAATTC (
36
)
4.6
0.0046
Cb medulloblastoma
TCCATATTTT (
3
)
4.6
0.0046
Cb medulloblastoma
TGAATGGCCT
(
3
)
4.6
0.0046
Cb medulloblastoma
CCCTGTGCAA
2.3
0.0023
Cb medulloblastoma
GAGAACAGCC
2.3
0.0023
Cb medulloblastoma
TCTGTTTCTA (
3
)
2.3
0.0023
P8 GC+1d culture
TGAATGGCCT
(
3
)
27.4
0.0274
P8 GC+1d culture
GTATTTAACA (
3
)
5.7
0.0057
P8 GC+1d culture
CCCTGAGGGT (
4
)
4.6
0.0046
P8 GC+1d culture
ATGTAACGAC
(
3
)
2.3
0.0023
P8 GC+1d culture
TCCATATTTT (
3
)
2.3
0.0023
P8 GC+1d culture
CAAGTGGACC
(
2
)
1.1
0.0011
P8 GC+1d culture
TCTGTTTCTA (
3
)
1.1
0.0011
P8 GC+SHH+1d culture
TGAATGGCCT
(
3
)
29.3
0.0293
P8 GC+SHH+1d culture
GTATTTAACA (
3
)
12.9
0.0129
P8 GC+SHH+1d culture
CCTTTAATTC (
36
)
7
0.007
P8 GC+SHH+1d culture
ATGTAACGAC
(
3
)
4.7
0.0047
P8 GC+SHH+1d culture
TCCATATTTT (
3
)
4.7
0.0047
P8 GC+SHH+1d culture
CCCTGAGGGT (
4
)
3.5
0.0035
3T3 fibroblasts
ATGTAACGAC
(
3
)
14
0.014
3T3 fibroblasts
CCCTGAGGGT (
4
)
14
0.014
3T3 fibroblasts
CCTTTAATTC (
36
)
7
0.007
3T3 fibroblasts
TGAATGGCCT
(
3
)
3.5
0.0035
E15 cortex
ACTTTTATCC (
4
)
4.9
0.0049
E15 cortex
CCTGTGCAAC
4.9
0.0049
E15 cortex
TGAATGGCCT
(
3
)
4.9
0.0049
P1 cortex
CCTTTAATTC (
36
)
13.6
0.0136
P1 cortex
CCCTGAGGGT (
4
)
9.1
0.0091
P1 cortex
TGAATGGCCT
(
3
)
9.1
0.0091
P1 cortex
ATGTAACGAC
(
3
)
4.5
0.0045
P1 cortex
TCCATATTTT (
3
)
4.5
0.0045
Hypothalamus
TGAATGGCCT
(
3
)
21.7
0.0217
Hypothalamus
GTATTTAACA (
3
)
19.9
0.0199
Hypothalamus
ATGTAACGAC
(
3
)
3.6
0.0036
Hypothalamus
CCCTGAGGGT (
4
)
3.6
0.0036
Hypothalamus
CAAGTGGACC
(
2
)
1.8
0.0018
Hypothalamus
GAGCTGGCCT (
8
)
1.8
0.0018
Hypothalamus
TCCATATTTT (
3
)
1.8
0.0018
E12.5 retina
TGAATGGCCT
(
3
)
35.7
0.0357
E12.5 retina
GTATTTAACA (
3
)
9.4
0.0094
E12.5 retina
ATGTAACGAC
(
3
)
5.6
0.0056
E12.5 retina
CCTTTAATTC (
36
)
3.8
0.0038
E12.5 retina
CCCTGAGGGT (
4
)
1.9
0.0019
E12.5 retina
TCTGTTTCTA (
3
)
1.9
0.0019
E14.5 retina
TGAATGGCCT
(
3
)
23.7
0.0237
E14.5 retina
CCTTTAATTC (
36
)
7.3
0.0073
E14.5 retina
GTATTTAACA (
3
)
7.3
0.0073
E14.5 retina
ATGTAACGAC
(
3
)
1.8
0.0018
E14.5 retina
CCTGTGCAAC
1.8
0.0018
E14.5 retina
TCCATATTTT (
3
)
1.8
0.0018
E14.5 retina
TCTGTTTCTA (
3
)
1.8
0.0018
E16.5 retina
TGAATGGCCT
(
3
)
23.5
0.0235
E16.5 retina
GTATTTAACA (
3
)
16.3
0.0163
E16.5 retina
CCTTTAATTC (
36
)
3.6
0.0036
E16.5 retina
GAGAACAGCC
3.6
0.0036
E16.5 retina
ATGTAACGAC
(
3
)
1.8
0.0018
E16.5 retina
CCCTGAGGGT (
4
)
1.8
0.0018
E16.5 retina
CCTGTGCAAC
1.8
0.0018
E16.5 retina
TCCATATTTT (
3
)
1.8
0.0018
E18.5 retina
TGAATGGCCT
(
3
)
36.4
0.0364
E18.5 retina
GTATTTAACA (
3
)
14.6
0.0146
E18.5 retina
ATGTAACGAC
(
3
)
5.5
0.0055
E18.5 retina
CCTTTAATTC (
36
)
1.8
0.0018
P0.5 retina
TGAATGGCCT
(
3
)
11.8
0.0118
P0.5 retina
GTATTTAACA (
3
)
7.9
0.0079
P0.5 retina
ATGTAACGAC
(
3
)
5.9
0.0059
P0.5 retina
CCTTTAATTC (
36
)
5.9
0.0059
P0.5 retina
CCCTGAGGGT (
4
)
2
0.002
P0.5 retina
CCTGTGCAAC
2
0.002
P2.5 retina
TGAATGGCCT
(
3
)
28.2
0.0282
P2.5 retina
GTATTTAACA (
3
)
14.1
0.0141
P2.5 retina
ACTTTTATCC (
4
)
3.5
0.0035
P2.5 retina
ATGTAACGAC
(
3
)
3.5
0.0035
P2.5 retina
CCCTGAGGGT (
4
)
3.5
0.0035
P2.5 retina
CCTTTAATTC (
36
)
1.8
0.0018
P2.5 retina
GAGAACAGCC
1.8
0.0018
P2.5 retina
TCCATATTTT (
3
)
1.8
0.0018
P4.5 retina
TGAATGGCCT
(
3
)
37.6
0.0376
P4.5 retina
GTATTTAACA (
3
)
17.8
0.0178
P4.5 retina
CCCTGAGGGT (
4
)
4
0.004
P4.5 retina
CCTTTAATTC (
36
)
4
0.004
P4.5 retina
TCCATATTTT (
3
)
4
0.004
P4.5 retina
ATGTAACGAC
(
3
)
2
0.002
P4.5 retina
CCCTGTGCAA
2
0.002
P4.5 retina
TCTGTTTCTA (
3
)
2
0.002
P6.5 retina
TGAATGGCCT
(
3
)
36.7
0.0367
P6.5 retina
GTATTTAACA (
3
)
6.7
0.0067
P6.5 retina
CCTTTAATTC (
36
)
5
0.005
P6.5 retina
CCCTGAGGGT (
4
)
3.3
0.0033
P6.5 retina
ATGTAACGAC
(
3
)
1.7
0.0017
P6.5 retina
CAAGTGGACC
(
2
)
1.7
0.0017
P10.5 crx- retina
CCCTGAGGGT (
4
)
7.4
0.0074
P10.5 crx- retina
GTATTTAACA (
3
)
5.6
0.0056
P10.5 crx- retina
TGAATGGCCT
(
3
)
3.7
0.0037
P10.5 crx- retina
CCTTTAATTC (
36
)
1.9
0.0019
P10.5 crx- retina
TCTGTTTCTA (
3
)
1.9
0.0019
P10.5 crx+ retina
TGAATGGCCT
(
3
)
17.3
0.0173
P10.5 crx+ retina
ATGTAACGAC
(
3
)
7.7
0.0077
P10.5 crx+ retina
CCCTGAGGGT (
4
)
3.8
0.0038
P10.5 crx+ retina
GTATTTAACA (
3
)
3.8
0.0038
P10.5 crx+ retina
CCCTGTGCAA
1.9
0.0019
P10.5 crx+ retina
TCCATATTTT (
3
)
1.9
0.0019
Adult retinal
TGAATGGCCT
(
3
)
11.1
0.0111
Adult retinal
CCCTGAGGGT (
4
)
9.3
0.0093
Adult retinal
ATGTAACGAC
(
3
)
7.4
0.0074
Adult retinal
GAGCTGGCCT (
8
)
3.7
0.0037
Adult retinal
CCTTTAATTC (
36
)
1.9
0.0019
Adult retinal
GTATTTAACA (
3
)
1.9
0.0019
ONL
GTATTTAACA (
3
)
5.7
0.0057
ONL
CCTTTAATTC (
36
)
3.8
0.0038
ONL
TCCATATTTT (
3
)
3.8
0.0038
ONL
ACTTTTATCC (
4
)
1.9
0.0019
ONL
ATGTAACGAC
(
3
)
1.9
0.0019
ONL
CCCTGAGGGT (
4
)
1.9
0.0019
ONL
TGAATGGCCT
(
3
)
1.9
0.0019
