Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.234587
Rufy2
RUN and FYVE domain-containing 2
10
10 32.0 cM
70432
Human Homolog
RUFY2[RUN and FYVE domain containing 2]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 44 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CAGAAAAAAA (
10
)
8.2
0.0082
P8 Cb GC
AAGCTGTTGG
4.9
0.0049
P8 Cb GC
GTGCCAAGGA
(
4
)
3.3
0.0033
Cb medulloblastoma
CAGAAAAAAA (
10
)
9.2
0.0092
Cb medulloblastoma
GTGCCAAGGA
(
4
)
9.2
0.0092
P8 GC+1d culture
GCTGCTGTGA (
3
)
2.3
0.0023
P8 GC+1d culture
CAGAAAAAAA (
10
)
1.1
0.0011
P8 GC+1d culture
GTGCCAAGGA
(
4
)
1.1
0.0011
P8 GC+SHH+1d culture
GTGCCAAGGA
(
4
)
7
0.007
P8 GC+SHH+1d culture
GCTGCTGTGA (
3
)
2.3
0.0023
3T3 fibroblasts
GCTGCTGTGA (
3
)
10.5
0.0105
E15 cortex
GTGCCAAGGA
(
4
)
4.9
0.0049
P1 cortex
GTGCCAAGGA
(
4
)
9.1
0.0091
P1 cortex
GCTGCTGTGA (
3
)
4.5
0.0045
Hypothalamus
GTGCCAAGGA
(
4
)
5.4
0.0054
E12.5 retina
AAACCCAAAA
(
7
)
3.8
0.0038
E12.5 retina
GTGCCAAGGA
(
4
)
3.8
0.0038
E12.5 retina
CAGAAAAAAA (
10
)
1.9
0.0019
E14.5 retina
GTGCCAAGGA
(
4
)
5.5
0.0055
E14.5 retina
CAGAAAAAAA (
10
)
1.8
0.0018
E14.5 retina
GCTGCTGTGA (
3
)
1.8
0.0018
E16.5 retina
GCTGCTGTGA (
3
)
1.8
0.0018
E16.5 retina
GTGCCAAGGA
(
4
)
1.8
0.0018
E18.5 retina
GTGCCAAGGA
(
4
)
9.1
0.0091
E18.5 retina
CAGAAAAAAA (
10
)
1.8
0.0018
E18.5 retina
GCTGCTGTGA (
3
)
1.8
0.0018
P0.5 retina
CAGAAAAAAA (
10
)
5.9
0.0059
P0.5 retina
GCTGCTGTGA (
3
)
3.9
0.0039
P2.5 retina
GTGCCAAGGA
(
4
)
10.6
0.0106
P2.5 retina
CAGAAAAAAA (
10
)
3.5
0.0035
P2.5 retina
AAACCCAAAA
(
7
)
1.8
0.0018
P4.5 retina
CAGAAAAAAA (
10
)
5.9
0.0059
P4.5 retina
GTGCCAAGGA
(
4
)
4
0.004
P6.5 retina
GCTGCTGTGA (
3
)
5
0.005
P6.5 retina
GTGCCAAGGA
(
4
)
5
0.005
P6.5 retina
CAGAAAAAAA (
10
)
1.7
0.0017
P10.5 crx- retina
GTGCCAAGGA
(
4
)
18.6
0.0186
P10.5 crx- retina
CAGAAAAAAA (
10
)
1.9
0.0019
P10.5 crx+ retina
GTGCCAAGGA
(
4
)
17.3
0.0173
P10.5 crx+ retina
CAGAAAAAAA (
10
)
5.8
0.0058
P10.5 crx+ retina
GCTGCTGTGA (
3
)
3.8
0.0038
Adult retinal
GTGCCAAGGA
(
4
)
5.6
0.0056
ONL
GTGCCAAGGA
(
4
)
7.7
0.0077
ONL
AAACCCAAAA
(
7
)
1.9
0.0019
