Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.23488
BC021367
cDNA sequence BC021367
8
234371
Mm.23488
D8Mgi34
DNA Segment, Chr 8, Mouse Genome Informatics 34
13
97910
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 38 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TAGATCCTAG (
4
)
24.5
0.0245
Cb medulloblastoma
TAGATCCTAG (
4
)
34.7
0.0347
Cb medulloblastoma
CCTGTCTCCC
(
5
)
2.3
0.0023
P8 GC+1d culture
TAGATCCTAG (
4
)
21.7
0.0217
P8 GC+1d culture
CCTGTCTCCC
(
5
)
1.1
0.0011
P8 GC+SHH+1d culture
TAGATCCTAG (
4
)
24.6
0.0246
P8 GC+SHH+1d culture
CCTGTCTCCC
(
5
)
1.2
0.0012
3T3 fibroblasts
CCTGTCTCCC
(
5
)
3.5
0.0035
3T3 fibroblasts
TGGCAGATAG (
7
)
3.5
0.0035
P1 cortex
TAGATCCTAG (
4
)
13.6
0.0136
P1 cortex
GTTACTGTAA (
3
)
4.5
0.0045
Hypothalamus
TAGATCCTAG (
4
)
38
0.038
Hypothalamus
TGGCAGATAG (
7
)
1.8
0.0018
E12.5 retina
TAGATCCTAG (
4
)
16.9
0.0169
E12.5 retina
GTTACTGTAA (
3
)
1.9
0.0019
E12.5 retina
TTGTTGGCAG
(
2
)
1.9
0.0019
E14.5 retina
TAGATCCTAG (
4
)
29.2
0.0292
E14.5 retina
AAGACCTGAG (
5
)
3.6
0.0036
E16.5 retina
TAGATCCTAG (
4
)
36.2
0.0362
E18.5 retina
TAGATCCTAG (
4
)
21.8
0.0218
E18.5 retina
TTGTTGGCAG
(
2
)
5.5
0.0055
E18.5 retina
GTTACTGTAA (
3
)
1.8
0.0018
P0.5 retina
TAGATCCTAG (
4
)
7.9
0.0079
P2.5 retina
TAGATCCTAG (
4
)
31.7
0.0317
P2.5 retina
CCTGTCTCCC
(
5
)
1.8
0.0018
P2.5 retina
GTTACTGTAA (
3
)
1.8
0.0018
P4.5 retina
TAGATCCTAG (
4
)
33.7
0.0337
P4.5 retina
GTTACTGTAA (
3
)
4
0.004
P6.5 retina
TAGATCCTAG (
4
)
20
0.02
P6.5 retina
CCTGTCTCCC
(
5
)
1.7
0.0017
P10.5 crx- retina
TAGATCCTAG (
4
)
35.3
0.0353
P10.5 crx- retina
CCTGTCTCCC
(
5
)
1.9
0.0019
P10.5 crx- retina
TGGCAGATAG (
7
)
1.9
0.0019
P10.5 crx+ retina
TAGATCCTAG (
4
)
19.2
0.0192
Adult retinal
CCTGTCTCCC
(
5
)
3.7
0.0037
Adult retinal
TAGATCCTAG (
4
)
3.7
0.0037
ONL
TAGATCCTAG (
4
)
9.6
0.0096
ONL
AAGACCTGAG (
5
)
3.8
0.0038
